Gene
RNA
| Item | Value |
|---|---|
| gene id | G428035 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 65222397 ~ 65222600 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU484862 | True | 204 | lncRNA | 0.49 | 1 | 65222397 | 65222600 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rorca | rorc1 | coding | downstream | 84437 | 65121824 ~ 65137960 (-) |
| LOC110524345 | sh3gl1 | coding | downstream | 113018 | 65091180 ~ 65109379 (-) |
| LOC110524344 | stap2 | coding | downstream | 138650 | 65060166 ~ 65083747 (-) |
| LOC110524339 | LOC106613811 | coding | downstream | 170915 | 65030479 ~ 65051482 (-) |
| LOC110524336 | chaf1a | coding | downstream | 199555 | 65011639 ~ 65022842 (-) |
| rgl1 | rgl1 | coding | upstream | 185222 | 65407822 ~ 65455011 (-) |
| colgalt2 | colgalt2 | coding | upstream | 241783 | 65464383 ~ 65507042 (-) |
| zgc:92140 | LOC106613825 | coding | upstream | 297707 | 65520307 ~ 65550070 (-) |
| LOC110524355 | edem3 | coding | upstream | 328745 | 65551345 ~ 65571173 (-) |
| fam78bb | LOC106613832 | coding | upstream | 455514 | 65678114 ~ 65681972 (-) |
| sema6bb | LOC106613817 | non-coding | downstream | 38513 | 65181687 ~ 65333174 (-) |
| G427950 | NA | non-coding | downstream | 136960 | 65084259 ~ 65085437 (-) |
| G427902 | ubxn6 | non-coding | downstream | 210799 | 64999708 ~ 65011598 (-) |
| G427906 | NA | non-coding | downstream | 225281 | 64994105 ~ 64997116 (-) |
| LOC110524335 | LOC106584403 | non-coding | downstream | 231379 | 64983341 ~ 64991018 (-) |
| G428048 | NA | non-coding | upstream | 29342 | 65251942 ~ 65252280 (-) |
| G428058 | NA | non-coding | upstream | 40553 | 65263153 ~ 65263382 (-) |
| G428063 | NA | non-coding | upstream | 45377 | 65267977 ~ 65268190 (-) |
| G428064 | NA | non-coding | upstream | 46559 | 65269159 ~ 65274229 (-) |
| G428079 | NA | non-coding | upstream | 77104 | 65299704 ~ 65299927 (-) |
| LOC110524332 | LOC106613803 | other | downstream | 311399 | 64903039 ~ 64911196 (-) |
| LOC110524330 | LOC106613802 | other | downstream | 489425 | 64701867 ~ 64810664 (-) |
| G427287 | NA | other | downstream | 654017 | 64566681 ~ 64568380 (-) |
| LOC110522986 | LOC106613472 | other | downstream | 936038 | 64283744 ~ 64297376 (-) |
| G428132 | NA | other | upstream | 147516 | 65370116 ~ 65382590 (-) |
| LOC110524398 | LOC106613863 | other | upstream | 1564451 | 66786837 ~ 66793995 (-) |
| lrrc7 | LOC106613881 | other | upstream | 2588005 | 67810595 ~ 67983549 (-) |
| bend5 | LOC106584333 | other | upstream | 3117604 | 68331871 ~ 68352828 (-) |
| G432310 | LOC106613894 | other | upstream | 3477221 | 68699821 ~ 68707448 (-) |
