Gene
RNA
| Item | Value |
|---|---|
| gene id | G428079 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 65299704 ~ 65299927 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU484907 | True | 224 | lncRNA | 0.36 | 1 | 65299704 | 65299927 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rorca | rorc1 | coding | downstream | 161744 | 65121824 ~ 65137960 (-) |
| LOC110524345 | sh3gl1 | coding | downstream | 190325 | 65091180 ~ 65109379 (-) |
| LOC110524344 | stap2 | coding | downstream | 215957 | 65060166 ~ 65083747 (-) |
| LOC110524339 | LOC106613811 | coding | downstream | 248222 | 65030479 ~ 65051482 (-) |
| LOC110524336 | chaf1a | coding | downstream | 276862 | 65011639 ~ 65022842 (-) |
| rgl1 | rgl1 | coding | upstream | 107895 | 65407822 ~ 65455011 (-) |
| colgalt2 | colgalt2 | coding | upstream | 164456 | 65464383 ~ 65507042 (-) |
| zgc:92140 | LOC106613825 | coding | upstream | 220380 | 65520307 ~ 65550070 (-) |
| LOC110524355 | edem3 | coding | upstream | 251418 | 65551345 ~ 65571173 (-) |
| fam78bb | LOC106613832 | coding | upstream | 378187 | 65678114 ~ 65681972 (-) |
| G428064 | NA | non-coding | downstream | 25475 | 65269159 ~ 65274229 (-) |
| G428063 | NA | non-coding | downstream | 31514 | 65267977 ~ 65268190 (-) |
| G428058 | NA | non-coding | downstream | 36322 | 65263153 ~ 65263382 (-) |
| G428048 | NA | non-coding | downstream | 47424 | 65251942 ~ 65252280 (-) |
| G428035 | NA | non-coding | downstream | 77104 | 65222397 ~ 65222600 (-) |
| G428082 | NA | non-coding | upstream | 3136 | 65303063 ~ 65303320 (-) |
| G428088 | NA | non-coding | upstream | 9819 | 65309746 ~ 65309979 (-) |
| G428100 | NA | non-coding | upstream | 23860 | 65323787 ~ 65324018 (-) |
| G428108 | NA | non-coding | upstream | 31297 | 65331224 ~ 65331438 (-) |
| G428131 | NA | non-coding | upstream | 69589 | 65369516 ~ 65369757 (-) |
| G427902 | ubxn6 | other | downstream | 288106 | 64999708 ~ 65011598 (-) |
| LOC110524332 | LOC106613803 | other | downstream | 388706 | 64903039 ~ 64911196 (-) |
| LOC110524330 | LOC106613802 | other | downstream | 566732 | 64701867 ~ 64810664 (-) |
| G427287 | NA | other | downstream | 731324 | 64566681 ~ 64568380 (-) |
| LOC110522986 | LOC106613472 | other | downstream | 1013345 | 64283744 ~ 64297376 (-) |
| G428132 | NA | other | upstream | 70189 | 65370116 ~ 65382590 (-) |
| LOC110524398 | LOC106613863 | other | upstream | 1487124 | 66786837 ~ 66793995 (-) |
| lrrc7 | LOC106613881 | other | upstream | 2510678 | 67810595 ~ 67983549 (-) |
| bend5 | LOC106584333 | other | upstream | 3040277 | 68331871 ~ 68352828 (-) |
| G432310 | LOC106613894 | other | upstream | 3399894 | 68699821 ~ 68707448 (-) |
