G427698


Basic Information

Item Value
gene id G427698
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65349497 ~ 65349976 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU484481
CCTCTCTATCATGTTGACAACAGTCTATGattgtcatacagtacacacttttattttttgttgttctaggctacctggctaaattGCTTGCTCGCTagactaacttcctttcatgggcaacgttagctagttaacattagacttctacatctagctactgttgaagtcaaaagtttacatacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggtttcaaacataaacatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaatctgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484481 True 480 lncRNA 0.38 1 65349497 65349976

Neighbor

gene id symbol gene type direction distance location
LOC110522880 NA coding upstream 172136 65175178 ~ 65177361 (+)
mpnd LOC106591182 coding upstream 259000 65083741 ~ 65090497 (+)
LOC110524340 fsd1 coding upstream 289443 65052280 ~ 65060054 (+)
LOC110524338 LOC106584398 coding upstream 320669 65024444 ~ 65028828 (+)
LOC110524337 ubxn6 coding upstream 337891 64998569 ~ 65011606 (+)
plin3 LOC106613818 coding downstream 6136 65356112 ~ 65366865 (+)
zgc:77486 LOC106613819 coding downstream 17210 65367186 ~ 65382613 (+)
abhd17ab LOC106613821 coding downstream 38085 65388061 ~ 65396176 (+)
LOC110524352 NA coding downstream 110601 65460577 ~ 65464681 (+)
npl npl coding downstream 221452 65571428 ~ 65581138 (+)
G427687 NA non-coding upstream 16541 65332162 ~ 65332956 (+)
G427659 NA non-coding upstream 50026 65299264 ~ 65299471 (+)
G427656 NA non-coding upstream 59095 65289892 ~ 65290402 (+)
G427650 NA non-coding upstream 68960 65280325 ~ 65280537 (+)
G427649 NA non-coding upstream 73019 65276223 ~ 65276478 (+)
G427736 NA non-coding downstream 85475 65435451 ~ 65436294 (+)
G427744 NA non-coding downstream 101305 65451281 ~ 65452641 (+)
G427793 NA non-coding downstream 165513 65515489 ~ 65517669 (+)
G427829 NA non-coding downstream 245798 65595774 ~ 65596022 (+)
G427838 NA non-coding downstream 256534 65606510 ~ 65643082 (+)
G427476 NA other upstream 352359 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 1104968 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 1170111 64177028 ~ 64183138 (+)
nfil3-4 LOC106614010 other upstream 1665258 63676409 ~ 63684848 (+)
G427747 NA other downstream 103880 65453856 ~ 65521380 (+)
G428696 NA other downstream 792103 66142079 ~ 66142605 (+)
G429156 NA other downstream 1631973 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 2110753 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 2753203 68103179 ~ 68103534 (+)

Expression


Co-expression Network