Gene
RNA
| Item | Value |
|---|---|
| gene id | G428132 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 65370116 ~ 65382590 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU484971 | False | 5578 | TUCP | 0.43 | 3 | 65370116 | 65382590 |
| TU484970 | True | 4934 | lncRNA | 0.41 | 2 | 65370826 | 65382590 |
65,358,000
65,360,000
65,362,000
65,364,000
65,366,000
65,368,000
65,370,000
65,372,000
65,374,000
65,376,000
65,378,000
65,380,000
65,382,000
65,384,000
65,386,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sema6bb | LOC106613817 | coding | downstream | 37652 | 65181687 ~ 65333174 (-) |
| rorca | rorc1 | coding | downstream | 232866 | 65121824 ~ 65137960 (-) |
| LOC110524345 | sh3gl1 | coding | downstream | 261447 | 65091180 ~ 65109379 (-) |
| LOC110524344 | stap2 | coding | downstream | 287079 | 65060166 ~ 65083747 (-) |
| LOC110524339 | LOC106613811 | coding | downstream | 319344 | 65030479 ~ 65051482 (-) |
| rgl1 | rgl1 | coding | upstream | 25232 | 65407822 ~ 65455011 (-) |
| colgalt2 | colgalt2 | coding | upstream | 81793 | 65464383 ~ 65507042 (-) |
| zgc:92140 | LOC106613825 | coding | upstream | 137717 | 65520307 ~ 65550070 (-) |
| LOC110524355 | edem3 | coding | upstream | 168755 | 65551345 ~ 65571173 (-) |
| fam78bb | LOC106613832 | coding | upstream | 295524 | 65678114 ~ 65681972 (-) |
| G428131 | NA | non-coding | downstream | 1069 | 65369516 ~ 65369757 (-) |
| G428108 | NA | non-coding | downstream | 39388 | 65331224 ~ 65331438 (-) |
| G428100 | NA | non-coding | downstream | 46808 | 65323787 ~ 65324018 (-) |
| G428088 | NA | non-coding | downstream | 60847 | 65309746 ~ 65309979 (-) |
| G428082 | NA | non-coding | downstream | 67506 | 65303063 ~ 65303320 (-) |
| G428165 | NA | non-coding | upstream | 52732 | 65435322 ~ 65436230 (-) |
| G428268 | NA | non-coding | upstream | 215741 | 65598331 ~ 65598560 (-) |
| G428269 | NA | non-coding | upstream | 216017 | 65598607 ~ 65598850 (-) |
| G428272 | NA | non-coding | upstream | 219790 | 65602380 ~ 65602588 (-) |
| G428273 | NA | non-coding | upstream | 220254 | 65602844 ~ 65603144 (-) |
| G427902 | ubxn6 | other | downstream | 359228 | 64999708 ~ 65011598 (-) |
| LOC110524332 | LOC106613803 | other | downstream | 459828 | 64903039 ~ 64911196 (-) |
| LOC110524330 | LOC106613802 | other | downstream | 637854 | 64701867 ~ 64810664 (-) |
| G427287 | NA | other | downstream | 802446 | 64566681 ~ 64568380 (-) |
| LOC110522986 | LOC106613472 | other | downstream | 1084467 | 64283744 ~ 64297376 (-) |
| LOC110524398 | LOC106613863 | other | upstream | 1404461 | 66786837 ~ 66793995 (-) |
| lrrc7 | LOC106613881 | other | upstream | 2428015 | 67810595 ~ 67983549 (-) |
| bend5 | LOC106584333 | other | upstream | 2957614 | 68331871 ~ 68352828 (-) |
| G432310 | LOC106613894 | other | upstream | 3317231 | 68699821 ~ 68707448 (-) |
| G432338 | NA | other | upstream | 3367627 | 68748558 ~ 68755057 (-) |
