G428165


Basic Information

Item Value
gene id G428165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65435322 ~ 65436230 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485021
gtttatagcctcgctactgttaaaTCCTCGCTAttatatatagcctcgctactgttaaaTCCTCGCTATTGTAtttagcctcgttactgttatatCCTCGCTATTGTAtttagcctcgttactgttatatcctcgctattgtatatagcctcgctactgttatagcctcgctactgttatagcctcgctattgtatatagcctcgctactgttatagcctcgctactgttatagcctcgctactgtatttagcctcgctactgtatttagcctcgctactgttatagcctcgctactgtatttagcctcgctactgtatatagcctcactactgttatagcctcgctactgtatttagcctcgctactgttatatcctcgctactgtatttagcctcgctactgtatatagcctcgctactgtatttagcctcgctactgtatttagcctcgctactgttatagcctcgctactgttatagcctcactactgtatttagcctcactactgttatagcctcgctactgttatagcctcgctactgtatttaaccttgctactgtatttaacctcgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485021 True 576 lncRNA 0.42 2 65435322 65436230

Neighbor

gene id symbol gene type direction distance location
sema6bb LOC106613817 coding downstream 102148 65181687 ~ 65333174 (-)
rorca rorc1 coding downstream 297362 65121824 ~ 65137960 (-)
LOC110524345 sh3gl1 coding downstream 325943 65091180 ~ 65109379 (-)
LOC110524344 stap2 coding downstream 351575 65060166 ~ 65083747 (-)
LOC110524339 LOC106613811 coding downstream 383840 65030479 ~ 65051482 (-)
colgalt2 colgalt2 coding upstream 28153 65464383 ~ 65507042 (-)
zgc:92140 LOC106613825 coding upstream 84077 65520307 ~ 65550070 (-)
LOC110524355 edem3 coding upstream 115115 65551345 ~ 65571173 (-)
fam78bb LOC106613832 coding upstream 241884 65678114 ~ 65681972 (-)
trabd2b LOC106613834 coding upstream 428388 65864618 ~ 65959260 (-)
G428132 NA non-coding downstream 52732 65370116 ~ 65382590 (-)
G428131 NA non-coding downstream 65565 65369516 ~ 65369757 (-)
G428108 NA non-coding downstream 103884 65331224 ~ 65331438 (-)
G428100 NA non-coding downstream 111304 65323787 ~ 65324018 (-)
G428088 NA non-coding downstream 125343 65309746 ~ 65309979 (-)
G428268 NA non-coding upstream 162101 65598331 ~ 65598560 (-)
G428269 NA non-coding upstream 162377 65598607 ~ 65598850 (-)
G428272 NA non-coding upstream 166150 65602380 ~ 65602588 (-)
G428273 NA non-coding upstream 166614 65602844 ~ 65603144 (-)
G428196 LOC106613830 non-coding upstream 207362 65643592 ~ 65643814 (-)
G427902 ubxn6 other downstream 423724 64999708 ~ 65011598 (-)
LOC110524332 LOC106613803 other downstream 524324 64903039 ~ 64911196 (-)
LOC110524330 LOC106613802 other downstream 702350 64701867 ~ 64810664 (-)
G427287 NA other downstream 866942 64566681 ~ 64568380 (-)
LOC110524398 LOC106613863 other upstream 1350821 66786837 ~ 66793995 (-)
lrrc7 LOC106613881 other upstream 2374375 67810595 ~ 67983549 (-)
bend5 LOC106584333 other upstream 2903974 68331871 ~ 68352828 (-)
G432310 LOC106613894 other upstream 3263591 68699821 ~ 68707448 (-)
G432338 NA other upstream 3313987 68748558 ~ 68755057 (-)

Expression


Co-expression Network