G427829


Basic Information

Item Value
gene id G427829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65595774 ~ 65596022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU484624
gctctggctgggccactcaagggcattcagagacttttctcgaagccactactgcgttatcttggctgtgtgcttagggccgttgtcctgctggaaggtgaaccatcaccccagtctgaggtcctgagcactctggagcaggttttcatcaagaatctgtctttactttgctccgttcatctttccctcgatcctgactcgtctcccagtcaCTACTGCTGAAaggcatccccacagcatgatgtcacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484624 True 249 lncRNA 0.53 1 65595774 65596022

Neighbor

gene id symbol gene type direction distance location
sec22bb LOC106613829 coding upstream 5026 65587136 ~ 65590748 (+)
LOC110524356 LOC106613828 coding upstream 8767 65581422 ~ 65587007 (+)
npl npl coding upstream 14636 65571428 ~ 65581138 (+)
LOC110524352 NA coding upstream 131093 65460577 ~ 65464681 (+)
abhd17ab LOC106613821 coding upstream 199598 65388061 ~ 65396176 (+)
notch2 LOC106613830 coding downstream 8097 65604119 ~ 65661449 (+)
slc35a3a LOC106613831 coding downstream 65940 65661962 ~ 65677841 (+)
foxe3 LOC106614014 coding downstream 107545 65703567 ~ 65705429 (+)
foxd2 LOC106613833 coding downstream 117444 65713466 ~ 65715867 (+)
znf692 LOC107695246 coding downstream 457942 66053964 ~ 66058160 (+)
G427793 NA non-coding upstream 78105 65515489 ~ 65517669 (+)
G427744 NA non-coding upstream 143133 65451281 ~ 65452641 (+)
G427736 NA non-coding upstream 159480 65435451 ~ 65436294 (+)
G427698 NA non-coding upstream 245798 65349497 ~ 65349976 (+)
G427687 NA non-coding upstream 262818 65332162 ~ 65332956 (+)
G427838 NA non-coding downstream 10488 65606510 ~ 65643082 (+)
G427859 NA non-coding downstream 57654 65653676 ~ 65654077 (+)
G427860 NA non-coding downstream 60749 65656771 ~ 65657094 (+)
G428321 NA non-coding downstream 101417 65697439 ~ 65697708 (+)
G427747 NA other upstream 74394 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 567072 65024444 ~ 65028828 (+)
G427476 NA other upstream 598636 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 1351245 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 1416388 64177028 ~ 64183138 (+)
G428696 NA other downstream 546057 66142079 ~ 66142605 (+)
G429156 NA other downstream 1385927 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1864707 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 2507157 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 2616694 68212224 ~ 68214236 (+)

Expression


Co-expression Network