G428268



Basic Information


Item Value
gene id G428268
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65598331 ~ 65598560 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU485125
TGGTGAGCAAGTGGATTTATTATGAAGAAAATGCTGTCTTGTTGTACACATATGCTCATGTGTTGTTATGACGGCTGTGGACATATAGCAGGCCTGTGATCGGGTGGTAAGGTACACAGATGGGGATGGAGGAAGCAGGCCCGGAGAACAGCCCTGCTCCACGCTGCACTGTGGTCCTCTATGAGAAGAGGACAGTTCCCAGGCCCCTGTGTGTACGTTGGGGGTTGGGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU485125 True 230 lncRNA 0.53 1 65598331 65598560

Neighbor


gene id symbol gene type direction distance location
LOC110524355 edem3 coding downstream 27158 65551345 ~ 65571173 (-)
zgc:92140 LOC106613825 coding downstream 48261 65520307 ~ 65550070 (-)
colgalt2 colgalt2 coding downstream 91289 65464383 ~ 65507042 (-)
rgl1 rgl1 coding downstream 143320 65407822 ~ 65455011 (-)
sema6bb LOC106613817 coding downstream 265157 65181687 ~ 65333174 (-)
fam78bb LOC106613832 coding upstream 79554 65678114 ~ 65681972 (-)
trabd2b LOC106613834 coding upstream 266058 65864618 ~ 65959260 (-)
LOC110524366 LOC106613835 coding upstream 447303 66045863 ~ 66050198 (-)
rfx2 LOC106613840 coding upstream 508277 66106837 ~ 66175123 (-)
mllt1a LOC106613842 coding upstream 614937 66213497 ~ 66241138 (-)
G428165 NA non-coding downstream 162101 65435322 ~ 65436230 (-)
G428132 NA non-coding downstream 215741 65370116 ~ 65382590 (-)
G428131 NA non-coding downstream 228574 65369516 ~ 65369757 (-)
G428108 NA non-coding downstream 266893 65331224 ~ 65331438 (-)
G428100 NA non-coding downstream 274313 65323787 ~ 65324018 (-)
G428269 NA non-coding upstream 47 65598607 ~ 65598850 (-)
G428272 NA non-coding upstream 3820 65602380 ~ 65602588 (-)
G428273 NA non-coding upstream 4284 65602844 ~ 65603144 (-)
G428196 LOC106613830 non-coding upstream 45032 65643592 ~ 65643814 (-)
G428195 LOC106613830 non-coding upstream 47778 65646338 ~ 65646555 (-)
G427902 ubxn6 other downstream 586733 64999708 ~ 65011598 (-)
LOC110524332 LOC106613803 other downstream 687333 64903039 ~ 64911196 (-)
LOC110524330 LOC106613802 other downstream 865359 64701867 ~ 64810664 (-)
G427287 NA other downstream 1029951 64566681 ~ 64568380 (-)
LOC110524398 LOC106613863 other upstream 1188491 66786837 ~ 66793995 (-)
lrrc7 LOC106613881 other upstream 2212045 67810595 ~ 67983549 (-)
bend5 LOC106584333 other upstream 2741644 68331871 ~ 68352828 (-)
G432310 LOC106613894 other upstream 3101261 68699821 ~ 68707448 (-)
G432338 NA other upstream 3151657 68748558 ~ 68755057 (-)

Expression



Co-expression Network