Gene
RNA
| Item | Value |
|---|---|
| gene id | G428194 |
| gene name | LOC106613830 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 65650127 ~ 65650644 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| neurogenic locus notch homolog protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU485050 | True | 518 | lncRNA | 0.61 | 1 | 65650127 | 65650644 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524355 | edem3 | coding | downstream | 78954 | 65551345 ~ 65571173 (-) |
| zgc:92140 | LOC106613825 | coding | downstream | 100057 | 65520307 ~ 65550070 (-) |
| colgalt2 | colgalt2 | coding | downstream | 143085 | 65464383 ~ 65507042 (-) |
| rgl1 | rgl1 | coding | downstream | 195116 | 65407822 ~ 65455011 (-) |
| sema6bb | LOC106613817 | coding | downstream | 316953 | 65181687 ~ 65333174 (-) |
| fam78bb | LOC106613832 | coding | upstream | 27470 | 65678114 ~ 65681972 (-) |
| trabd2b | LOC106613834 | coding | upstream | 213974 | 65864618 ~ 65959260 (-) |
| LOC110524366 | LOC106613835 | coding | upstream | 395219 | 66045863 ~ 66050198 (-) |
| rfx2 | LOC106613840 | coding | upstream | 456193 | 66106837 ~ 66175123 (-) |
| mllt1a | LOC106613842 | coding | upstream | 562853 | 66213497 ~ 66241138 (-) |
| G428200 | NA | non-coding | downstream | 1297 | 65648293 ~ 65648830 (-) |
| G428195 | LOC106613830 | non-coding | downstream | 3572 | 65646338 ~ 65646555 (-) |
| G428196 | LOC106613830 | non-coding | downstream | 6313 | 65643592 ~ 65643814 (-) |
| G428273 | NA | non-coding | downstream | 46983 | 65602844 ~ 65603144 (-) |
| G428272 | NA | non-coding | downstream | 47539 | 65602380 ~ 65602588 (-) |
| G428188 | LOC106613830 | non-coding | upstream | 657 | 65651301 ~ 65651627 (-) |
| G428359 | NA | non-coding | upstream | 80057 | 65730701 ~ 65730985 (-) |
| G428369 | NA | non-coding | upstream | 92265 | 65742909 ~ 65743117 (-) |
| G428371 | NA | non-coding | upstream | 93078 | 65743722 ~ 65744226 (-) |
| G428373 | NA | non-coding | upstream | 101496 | 65752140 ~ 65752521 (-) |
| G428132 | NA | other | downstream | 267537 | 65370116 ~ 65382590 (-) |
| G427902 | ubxn6 | other | downstream | 638529 | 64999708 ~ 65011598 (-) |
| LOC110524332 | LOC106613803 | other | downstream | 739129 | 64903039 ~ 64911196 (-) |
| LOC110524330 | LOC106613802 | other | downstream | 917155 | 64701867 ~ 64810664 (-) |
| G427287 | NA | other | downstream | 1081747 | 64566681 ~ 64568380 (-) |
| LOC110524398 | LOC106613863 | other | upstream | 1136407 | 66786837 ~ 66793995 (-) |
| lrrc7 | LOC106613881 | other | upstream | 2159961 | 67810595 ~ 67983549 (-) |
| bend5 | LOC106584333 | other | upstream | 2689560 | 68331871 ~ 68352828 (-) |
| G432310 | LOC106613894 | other | upstream | 3049177 | 68699821 ~ 68707448 (-) |
| G432338 | NA | other | upstream | 3099573 | 68748558 ~ 68755057 (-) |
