G427859


Basic Information

Item Value
gene id G427859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65653676 ~ 65654077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU484656
ttgctctgacatgcactgtcaactgtgggaccttatagagacaggtgtgtCCCTTTCCAATCATGTctaatcagttgaatttaccacaggtggactccaataaagttgtagaaacatctcaaggatgatcaatggaaacaggatgcacctgatctcaatttcaagtctcatagcaaagggtctgaatacttatgtaaataaggtattcctgTTTTGGTTTTGCAacaattttttaaaaaatgttttcactttgtcattatggggtattgtgtgtagattgatgaggataatgttttttttttaatccattttagaataaggctgtaatgtaacaaaatgtgaaaaaagtcaaggggtctgaatactttccgaatgcactgtatatactgaacgaaatatgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484656 True 402 lncRNA 0.35 1 65653676 65654077

Neighbor

gene id symbol gene type direction distance location
sec22bb LOC106613829 coding upstream 62928 65587136 ~ 65590748 (+)
LOC110524356 LOC106613828 coding upstream 66669 65581422 ~ 65587007 (+)
npl npl coding upstream 72538 65571428 ~ 65581138 (+)
LOC110524352 NA coding upstream 188995 65460577 ~ 65464681 (+)
abhd17ab LOC106613821 coding upstream 257500 65388061 ~ 65396176 (+)
slc35a3a LOC106613831 coding downstream 7885 65661962 ~ 65677841 (+)
foxe3 LOC106614014 coding downstream 49490 65703567 ~ 65705429 (+)
foxd2 LOC106613833 coding downstream 59389 65713466 ~ 65715867 (+)
znf692 LOC107695246 coding downstream 399887 66053964 ~ 66058160 (+)
fcho1 LOC106613838 coding downstream 405017 66059094 ~ 66106566 (+)
G427838 NA non-coding upstream 10594 65606510 ~ 65643082 (+)
G427829 NA non-coding upstream 57654 65595774 ~ 65596022 (+)
G427793 NA non-coding upstream 136007 65515489 ~ 65517669 (+)
G427744 NA non-coding upstream 201035 65451281 ~ 65452641 (+)
G427736 NA non-coding upstream 217382 65435451 ~ 65436294 (+)
G427860 NA non-coding downstream 2694 65656771 ~ 65657094 (+)
notch2 LOC106613830 non-coding downstream 4877 65604119 ~ 65661449 (+)
G428321 NA non-coding downstream 43362 65697439 ~ 65697708 (+)
G428365 NA non-coding downstream 82902 65736979 ~ 65737304 (+)
G428370 NA non-coding downstream 89645 65743722 ~ 65744337 (+)
G427747 NA other upstream 132296 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 624974 65024444 ~ 65028828 (+)
G427476 NA other upstream 656538 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 1409147 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 1474290 64177028 ~ 64183138 (+)
G428696 NA other downstream 488002 66142079 ~ 66142605 (+)
G429156 NA other downstream 1327872 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1806652 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 2449102 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 2558639 68212224 ~ 68214236 (+)

Expression


Co-expression Network