G428365


Basic Information

Item Value
gene id G428365
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65736979 ~ 65737304 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485229
gtgttgatgtgagccatgaccagtctttcaaagcccTTTATAATGACAGATGTGTGTGCTagagggcgatagtcatttaggcaggttaccttggagttcttgggaacagggacaatggtggtcggcttgaaacatgttgggattacagactgggacaaggcgAGATTAAAAATGTCTGTAAAGACACTTGGCAGCTGGTTTGTGCAAGCTCTGAGAGCACGCCCTGGTATTCCATCTGGGCCCGGCGGTCtaggttttactcacattggccacgAAGCGAAATCACACAGTCATCCTGAACAACAGGGGCTTTCCGACAAGACTGT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485229 True 326 lncRNA 0.49 1 65736979 65737304

Neighbor

gene id symbol gene type direction distance location
foxd2 LOC106613833 coding upstream 21112 65713466 ~ 65715867 (+)
foxe3 LOC106614014 coding upstream 31550 65703567 ~ 65705429 (+)
slc35a3a LOC106613831 coding upstream 59138 65661962 ~ 65677841 (+)
notch2 LOC106613830 coding upstream 75530 65604119 ~ 65661449 (+)
sec22bb LOC106613829 coding upstream 146231 65587136 ~ 65590748 (+)
znf692 LOC107695246 coding downstream 316660 66053964 ~ 66058160 (+)
fcho1 LOC106613838 coding downstream 321790 66059094 ~ 66106566 (+)
acsbg2 LOC106613839 coding downstream 446359 66183663 ~ 66210856 (+)
LOC118964639 NA coding downstream 503236 66240540 ~ 66248348 (+)
LOC110524376 LOC106613845 coding downstream 603277 66340581 ~ 66349235 (+)
G428321 NA non-coding upstream 39271 65697439 ~ 65697708 (+)
G427860 NA non-coding upstream 79885 65656771 ~ 65657094 (+)
G427859 NA non-coding upstream 82902 65653676 ~ 65654077 (+)
G427838 NA non-coding upstream 93897 65606510 ~ 65643082 (+)
G428370 NA non-coding downstream 6418 65743722 ~ 65744337 (+)
G428374 NA non-coding downstream 19428 65756732 ~ 65757008 (+)
G428375 NA non-coding downstream 25382 65762686 ~ 65762936 (+)
G428379 NA non-coding downstream 32555 65769859 ~ 65770273 (+)
G428382 NA non-coding downstream 42669 65779973 ~ 65780285 (+)
G427747 NA other upstream 215599 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 708277 65024444 ~ 65028828 (+)
G427476 NA other upstream 739841 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 1492450 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 1557593 64177028 ~ 64183138 (+)
G428696 NA other downstream 404775 66142079 ~ 66142605 (+)
G429156 NA other downstream 1244645 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1723425 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 2365875 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 2475412 68212224 ~ 68214236 (+)

Expression


Co-expression Network