G428371


Basic Information

Item Value
gene id G428371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65743722 ~ 65744226 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485235
tacagtcccagtaacagctacagcccctcacagtcccagtgtacagctacagcccctacagtccaggtaacagctacagcccctcacagtcccagtaacagctgcagcccctacagtcccagtggacagctacagcccctacagtcccagtaacagctacagcccctacagtcccagtaacagctacagcccctcacagtcccagtgtacagctacagccccttacagtcccagtaacagctacagcccctcacagtcccagtaacagctacagcccctacagtcccagtgtacagctacagcccctacagtcccagtaacagctacagcccctacagtcccagtaacagctacagcccctacagtcccagtgtacagctacagcccctacagtcccagtaacagctataGCCCCTCACAGtgtcagtaacagctacagcccctcacagtcccagtgtacagctacagccccttacagtctcagtgtacagctacagcccatTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485235 True 505 lncRNA 0.56 1 65743722 65744226

Neighbor

gene id symbol gene type direction distance location
fam78bb LOC106613832 coding downstream 61750 65678114 ~ 65681972 (-)
LOC110524355 edem3 coding downstream 172549 65551345 ~ 65571173 (-)
zgc:92140 LOC106613825 coding downstream 193652 65520307 ~ 65550070 (-)
colgalt2 colgalt2 coding downstream 236680 65464383 ~ 65507042 (-)
rgl1 rgl1 coding downstream 288711 65407822 ~ 65455011 (-)
trabd2b LOC106613834 coding upstream 120392 65864618 ~ 65959260 (-)
LOC110524366 LOC106613835 coding upstream 301637 66045863 ~ 66050198 (-)
rfx2 LOC106613840 coding upstream 362611 66106837 ~ 66175123 (-)
mllt1a LOC106613842 coding upstream 469271 66213497 ~ 66241138 (-)
acer1 acer1 coding upstream 500154 66244380 ~ 66249228 (-)
G428369 NA non-coding downstream 605 65742909 ~ 65743117 (-)
G428359 NA non-coding downstream 12737 65730701 ~ 65730985 (-)
G428188 LOC106613830 non-coding downstream 92095 65651301 ~ 65651627 (-)
G428194 LOC106613830 non-coding downstream 93078 65650127 ~ 65650644 (-)
G428200 NA non-coding downstream 94892 65648293 ~ 65648830 (-)
G428373 NA non-coding upstream 7914 65752140 ~ 65752521 (-)
G428376 NA non-coding upstream 23156 65767382 ~ 65767743 (-)
G428380 NA non-coding upstream 26765 65770991 ~ 65771332 (-)
G428381 NA non-coding upstream 33911 65778137 ~ 65778374 (-)
G428419 NA non-coding upstream 81207 65825433 ~ 65825723 (-)
G428132 NA other downstream 361132 65370116 ~ 65382590 (-)
G427902 ubxn6 other downstream 732124 64999708 ~ 65011598 (-)
LOC110524332 LOC106613803 other downstream 832724 64903039 ~ 64911196 (-)
LOC110524330 LOC106613802 other downstream 1010750 64701867 ~ 64810664 (-)
G427287 NA other downstream 1175342 64566681 ~ 64568380 (-)
LOC110524398 LOC106613863 other upstream 1042825 66786837 ~ 66793995 (-)
lrrc7 LOC106613881 other upstream 2066379 67810595 ~ 67983549 (-)
bend5 LOC106584333 other upstream 2595978 68331871 ~ 68352828 (-)
G432310 LOC106613894 other upstream 2955595 68699821 ~ 68707448 (-)
G432338 NA other upstream 3005991 68748558 ~ 68755057 (-)

Expression


Co-expression Network