G428373



Basic Information


Item Value
gene id G428373
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65752140 ~ 65752521 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU485237
agctacagcccctacagtcccagtaacagctacagccccttacagtcccagtaacagctacagcccctcacagtcccagtaacagctacagcccctcacagtgtcagtaacagctacagcccctcacagtcccagtgtacagctacagccccttacagtctcagtgtacagctacagcccatTACAGTCCTAGTTACAGCTACATCCCCTACAGTCCTAGTAAcagttacagcccctcacagtcccagtgtacagttacagcccctcacagtcccagtcacAGCTACAGCTCCTTACAGTCCTAGTAAcagttacagcccctcacagtcccagtgtacagttacagcccctcacagtcccagtaacagctacagccccttac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU485237 True 382 lncRNA 0.53 1 65752140 65752521

Neighbor


gene id symbol gene type direction distance location
fam78bb LOC106613832 coding downstream 70168 65678114 ~ 65681972 (-)
LOC110524355 edem3 coding downstream 180967 65551345 ~ 65571173 (-)
zgc:92140 LOC106613825 coding downstream 202070 65520307 ~ 65550070 (-)
colgalt2 colgalt2 coding downstream 245098 65464383 ~ 65507042 (-)
rgl1 rgl1 coding downstream 297129 65407822 ~ 65455011 (-)
trabd2b LOC106613834 coding upstream 112097 65864618 ~ 65959260 (-)
LOC110524366 LOC106613835 coding upstream 293342 66045863 ~ 66050198 (-)
rfx2 LOC106613840 coding upstream 354316 66106837 ~ 66175123 (-)
mllt1a LOC106613842 coding upstream 460976 66213497 ~ 66241138 (-)
acer1 acer1 coding upstream 491859 66244380 ~ 66249228 (-)
G428371 NA non-coding downstream 7914 65743722 ~ 65744226 (-)
G428369 NA non-coding downstream 9023 65742909 ~ 65743117 (-)
G428359 NA non-coding downstream 21155 65730701 ~ 65730985 (-)
G428188 LOC106613830 non-coding downstream 100513 65651301 ~ 65651627 (-)
G428194 LOC106613830 non-coding downstream 101496 65650127 ~ 65650644 (-)
G428376 NA non-coding upstream 14861 65767382 ~ 65767743 (-)
G428380 NA non-coding upstream 18470 65770991 ~ 65771332 (-)
G428381 NA non-coding upstream 25616 65778137 ~ 65778374 (-)
G428419 NA non-coding upstream 72912 65825433 ~ 65825723 (-)
G428509 NA non-coding upstream 127678 65880199 ~ 65882002 (-)
G428132 NA other downstream 369550 65370116 ~ 65382590 (-)
G427902 ubxn6 other downstream 740542 64999708 ~ 65011598 (-)
LOC110524332 LOC106613803 other downstream 841142 64903039 ~ 64911196 (-)
LOC110524330 LOC106613802 other downstream 1019168 64701867 ~ 64810664 (-)
G427287 NA other downstream 1183760 64566681 ~ 64568380 (-)
LOC110524398 LOC106613863 other upstream 1034530 66786837 ~ 66793995 (-)
lrrc7 LOC106613881 other upstream 2058084 67810595 ~ 67983549 (-)
bend5 LOC106584333 other upstream 2587683 68331871 ~ 68352828 (-)
G432310 LOC106613894 other upstream 2947300 68699821 ~ 68707448 (-)
G432338 NA other upstream 2997696 68748558 ~ 68755057 (-)

Expression



Co-expression Network