Gene
RNA
| Item | Value |
|---|---|
| gene id | G428375 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 65762686 ~ 65762936 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU485239 | True | 251 | lncRNA | 0.55 | 1 | 65762686 | 65762936 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| foxd2 | LOC106613833 | coding | upstream | 46819 | 65713466 ~ 65715867 (+) |
| foxe3 | LOC106614014 | coding | upstream | 57257 | 65703567 ~ 65705429 (+) |
| slc35a3a | LOC106613831 | coding | upstream | 84845 | 65661962 ~ 65677841 (+) |
| notch2 | LOC106613830 | coding | upstream | 101237 | 65604119 ~ 65661449 (+) |
| sec22bb | LOC106613829 | coding | upstream | 171938 | 65587136 ~ 65590748 (+) |
| znf692 | LOC107695246 | coding | downstream | 291028 | 66053964 ~ 66058160 (+) |
| fcho1 | LOC106613838 | coding | downstream | 296158 | 66059094 ~ 66106566 (+) |
| acsbg2 | LOC106613839 | coding | downstream | 420727 | 66183663 ~ 66210856 (+) |
| LOC118964639 | NA | coding | downstream | 477604 | 66240540 ~ 66248348 (+) |
| LOC110524376 | LOC106613845 | coding | downstream | 577645 | 66340581 ~ 66349235 (+) |
| G428374 | NA | non-coding | upstream | 5678 | 65756732 ~ 65757008 (+) |
| G428370 | NA | non-coding | upstream | 18349 | 65743722 ~ 65744337 (+) |
| G428365 | NA | non-coding | upstream | 25382 | 65736979 ~ 65737304 (+) |
| G428321 | NA | non-coding | upstream | 64978 | 65697439 ~ 65697708 (+) |
| G428379 | NA | non-coding | downstream | 6923 | 65769859 ~ 65770273 (+) |
| G428382 | NA | non-coding | downstream | 17037 | 65779973 ~ 65780285 (+) |
| G428385 | NA | non-coding | downstream | 19511 | 65782447 ~ 65782658 (+) |
| G428388 | NA | non-coding | downstream | 21369 | 65784305 ~ 65784560 (+) |
| G428393 | NA | non-coding | downstream | 25437 | 65788373 ~ 65798494 (+) |
| G427747 | NA | other | upstream | 241306 | 65453856 ~ 65521380 (+) |
| LOC110524338 | LOC106584398 | other | upstream | 733984 | 65024444 ~ 65028828 (+) |
| G427476 | NA | other | upstream | 765548 | 64992101 ~ 64997138 (+) |
| LOC110522985 | NA | other | upstream | 1518157 | 64243153 ~ 64244790 (+) |
| sac3d1 | sac3d1 | other | upstream | 1583300 | 64177028 ~ 64183138 (+) |
| G428696 | NA | other | downstream | 379143 | 66142079 ~ 66142605 (+) |
| G429156 | NA | other | downstream | 1219013 | 66981949 ~ 67048164 (+) |
| LOC110524407 | LOC106613876 | other | downstream | 1697793 | 67458540 ~ 67464323 (+) |
| G430796 | LOC106613888 | other | downstream | 2340243 | 68103179 ~ 68103534 (+) |
| LOC110524423 | LOC106613476 | other | downstream | 2449780 | 68212224 ~ 68214236 (+) |
