G428382


Basic Information

Item Value
gene id G428382
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65779973 ~ 65780285 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485246
atcagcagtagaaacaataataAAGCACATCCCCGCTCcttttttggtaaaaagctgaggaatgGGGCAGGTGAGATGTAACCACCctaaaattcatagacagagctatggacgcaaggactgaccatccataatatcaaaatgatagttttaaccatattCTGAGGCAActgtatatagtgtttgtttacatttactttgtttacaaacattggagtaaaacaagcttatattttgagttctgatggggtatgacagttaaactaagctcaaGTTCAATTCTTCAATAATCAACTGGTACAAAATATATGCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485246 True 313 lncRNA 0.35 1 65779973 65780285

Neighbor

gene id symbol gene type direction distance location
foxd2 LOC106613833 coding upstream 64106 65713466 ~ 65715867 (+)
foxe3 LOC106614014 coding upstream 74544 65703567 ~ 65705429 (+)
slc35a3a LOC106613831 coding upstream 102132 65661962 ~ 65677841 (+)
notch2 LOC106613830 coding upstream 118524 65604119 ~ 65661449 (+)
sec22bb LOC106613829 coding upstream 189225 65587136 ~ 65590748 (+)
znf692 LOC107695246 coding downstream 273679 66053964 ~ 66058160 (+)
fcho1 LOC106613838 coding downstream 278809 66059094 ~ 66106566 (+)
acsbg2 LOC106613839 coding downstream 403378 66183663 ~ 66210856 (+)
LOC118964639 NA coding downstream 460255 66240540 ~ 66248348 (+)
LOC110524376 LOC106613845 coding downstream 560296 66340581 ~ 66349235 (+)
G428379 NA non-coding upstream 9700 65769859 ~ 65770273 (+)
G428375 NA non-coding upstream 17037 65762686 ~ 65762936 (+)
G428374 NA non-coding upstream 22965 65756732 ~ 65757008 (+)
G428370 NA non-coding upstream 35636 65743722 ~ 65744337 (+)
G428365 NA non-coding upstream 42669 65736979 ~ 65737304 (+)
G428385 NA non-coding downstream 2162 65782447 ~ 65782658 (+)
G428388 NA non-coding downstream 4020 65784305 ~ 65784560 (+)
G428393 NA non-coding downstream 8088 65788373 ~ 65798494 (+)
G428420 NA non-coding downstream 45753 65826038 ~ 65826288 (+)
G428449 NA non-coding downstream 70340 65850625 ~ 65850861 (+)
G427747 NA other upstream 258593 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 751271 65024444 ~ 65028828 (+)
G427476 NA other upstream 782835 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 1535444 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 1600587 64177028 ~ 64183138 (+)
G428696 NA other downstream 361794 66142079 ~ 66142605 (+)
G429156 NA other downstream 1201664 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1680444 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 2322894 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 2432431 68212224 ~ 68214236 (+)

Expression


Co-expression Network