G428385


Basic Information

Item Value
gene id G428385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65782447 ~ 65782658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485249
atacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagtgcagagagcatcatgaagaacaaggaacacaccaagcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485249 True 212 lncRNA 0.43 1 65782447 65782658

Neighbor

gene id symbol gene type direction distance location
foxd2 LOC106613833 coding upstream 66580 65713466 ~ 65715867 (+)
foxe3 LOC106614014 coding upstream 77018 65703567 ~ 65705429 (+)
slc35a3a LOC106613831 coding upstream 104606 65661962 ~ 65677841 (+)
notch2 LOC106613830 coding upstream 120998 65604119 ~ 65661449 (+)
sec22bb LOC106613829 coding upstream 191699 65587136 ~ 65590748 (+)
znf692 LOC107695246 coding downstream 271306 66053964 ~ 66058160 (+)
fcho1 LOC106613838 coding downstream 276436 66059094 ~ 66106566 (+)
acsbg2 LOC106613839 coding downstream 401005 66183663 ~ 66210856 (+)
LOC118964639 NA coding downstream 457882 66240540 ~ 66248348 (+)
LOC110524376 LOC106613845 coding downstream 557923 66340581 ~ 66349235 (+)
G428382 NA non-coding upstream 2162 65779973 ~ 65780285 (+)
G428379 NA non-coding upstream 12174 65769859 ~ 65770273 (+)
G428375 NA non-coding upstream 19511 65762686 ~ 65762936 (+)
G428374 NA non-coding upstream 25439 65756732 ~ 65757008 (+)
G428370 NA non-coding upstream 38110 65743722 ~ 65744337 (+)
G428388 NA non-coding downstream 1647 65784305 ~ 65784560 (+)
G428393 NA non-coding downstream 5715 65788373 ~ 65798494 (+)
G428420 NA non-coding downstream 43380 65826038 ~ 65826288 (+)
G428449 NA non-coding downstream 67967 65850625 ~ 65850861 (+)
G428570 NA non-coding downstream 188792 65971450 ~ 65971682 (+)
G427747 NA other upstream 261067 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 753745 65024444 ~ 65028828 (+)
G427476 NA other upstream 785309 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 1537918 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 1603061 64177028 ~ 64183138 (+)
G428696 NA other downstream 359421 66142079 ~ 66142605 (+)
G429156 NA other downstream 1199291 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1678071 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 2320521 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 2430058 68212224 ~ 68214236 (+)

Expression


Co-expression Network