G428570


Basic Information

Item Value
gene id G428570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 65971450 ~ 65971682 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485440
ccaaaatgcagcgtggttatttcgatacatctttaatcaaagataaacacgaacaatacaaaaacaataaacataccgtgaaaacctaaacttatctggtgcaaacaaacacagagacaggaacaatcacccacaaaacactcaaagaatatggctgcctaaatatggttcccaatcagagacaacgataaacacctgcctctgattgagaaccacttcaggcaaccatagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485440 True 233 lncRNA 0.39 1 65971450 65971682

Neighbor

gene id symbol gene type direction distance location
foxd2 LOC106613833 coding upstream 255583 65713466 ~ 65715867 (+)
foxe3 LOC106614014 coding upstream 266021 65703567 ~ 65705429 (+)
slc35a3a LOC106613831 coding upstream 293609 65661962 ~ 65677841 (+)
notch2 LOC106613830 coding upstream 310001 65604119 ~ 65661449 (+)
sec22bb LOC106613829 coding upstream 380702 65587136 ~ 65590748 (+)
znf692 LOC107695246 coding downstream 82282 66053964 ~ 66058160 (+)
fcho1 LOC106613838 coding downstream 87412 66059094 ~ 66106566 (+)
acsbg2 LOC106613839 coding downstream 211981 66183663 ~ 66210856 (+)
LOC118964639 NA coding downstream 268858 66240540 ~ 66248348 (+)
LOC110524376 LOC106613845 coding downstream 368899 66340581 ~ 66349235 (+)
G428449 NA non-coding upstream 120589 65850625 ~ 65850861 (+)
G428420 NA non-coding upstream 145162 65826038 ~ 65826288 (+)
G428393 NA non-coding upstream 172956 65788373 ~ 65798494 (+)
G428388 NA non-coding upstream 186890 65784305 ~ 65784560 (+)
G428385 NA non-coding upstream 188792 65782447 ~ 65782658 (+)
G428576 NA non-coding downstream 11569 65983251 ~ 66034123 (+)
G428578 NA non-coding downstream 53471 66025153 ~ 66028568 (+)
G428625 NA non-coding downstream 72845 66044527 ~ 66045201 (+)
G428626 NA non-coding downstream 79491 66051173 ~ 66051372 (+)
G427747 NA other upstream 450070 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 942748 65024444 ~ 65028828 (+)
G427476 NA other upstream 974312 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 1726921 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 1792064 64177028 ~ 64183138 (+)
G428696 NA other downstream 170397 66142079 ~ 66142605 (+)
G429156 NA other downstream 1010267 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1489047 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 2131497 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 2241034 68212224 ~ 68214236 (+)

Expression


Co-expression Network