Gene
RNA
| Item | Value |
|---|---|
| gene id | G428578 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 66025153 ~ 66028568 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU485507 | True | 794 | lncRNA | 0.30 | 2 | 66025153 | 66028568 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| foxd2 | LOC106613833 | coding | upstream | 309286 | 65713466 ~ 65715867 (+) |
| foxe3 | LOC106614014 | coding | upstream | 319724 | 65703567 ~ 65705429 (+) |
| slc35a3a | LOC106613831 | coding | upstream | 347312 | 65661962 ~ 65677841 (+) |
| notch2 | LOC106613830 | coding | upstream | 363704 | 65604119 ~ 65661449 (+) |
| sec22bb | LOC106613829 | coding | upstream | 434405 | 65587136 ~ 65590748 (+) |
| znf692 | LOC107695246 | coding | downstream | 25396 | 66053964 ~ 66058160 (+) |
| fcho1 | LOC106613838 | coding | downstream | 30526 | 66059094 ~ 66106566 (+) |
| acsbg2 | LOC106613839 | coding | downstream | 155095 | 66183663 ~ 66210856 (+) |
| LOC118964639 | NA | coding | downstream | 211972 | 66240540 ~ 66248348 (+) |
| LOC110524376 | LOC106613845 | coding | downstream | 312013 | 66340581 ~ 66349235 (+) |
| G428570 | NA | non-coding | upstream | 53471 | 65971450 ~ 65971682 (+) |
| G428449 | NA | non-coding | upstream | 174292 | 65850625 ~ 65850861 (+) |
| G428420 | NA | non-coding | upstream | 198865 | 65826038 ~ 65826288 (+) |
| G428393 | NA | non-coding | upstream | 226659 | 65788373 ~ 65798494 (+) |
| G428388 | NA | non-coding | upstream | 240593 | 65784305 ~ 65784560 (+) |
| G428625 | NA | non-coding | downstream | 15959 | 66044527 ~ 66045201 (+) |
| G428626 | NA | non-coding | downstream | 22605 | 66051173 ~ 66051372 (+) |
| G428637 | NA | non-coding | downstream | 78565 | 66107133 ~ 66108885 (+) |
| G428669 | NA | non-coding | downstream | 81670 | 66110238 ~ 66110481 (+) |
| G427747 | NA | other | upstream | 503773 | 65453856 ~ 65521380 (+) |
| LOC110524338 | LOC106584398 | other | upstream | 996451 | 65024444 ~ 65028828 (+) |
| G427476 | NA | other | upstream | 1028015 | 64992101 ~ 64997138 (+) |
| LOC110522985 | NA | other | upstream | 1780624 | 64243153 ~ 64244790 (+) |
| sac3d1 | sac3d1 | other | upstream | 1845767 | 64177028 ~ 64183138 (+) |
| G428696 | NA | other | downstream | 113511 | 66142079 ~ 66142605 (+) |
| G429156 | NA | other | downstream | 953381 | 66981949 ~ 67048164 (+) |
| LOC110524407 | LOC106613876 | other | downstream | 1432161 | 67458540 ~ 67464323 (+) |
| G430796 | LOC106613888 | other | downstream | 2074611 | 68103179 ~ 68103534 (+) |
| LOC110524423 | LOC106613476 | other | downstream | 2184148 | 68212224 ~ 68214236 (+) |
