G428626


Basic Information

Item Value
gene id G428626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66051173 ~ 66051372 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485562
ggttttgtcatgccctcttcacaactgtcttggtgtgtttggaccatgatagatcatgggtgatgtggacaccaaggaacttgaaactctcgaccagctccactacagaagtcgatgttaatgggggcctgtttggcccgccttttcctgtagtccacgatcagctcctttgtcttgctcccattgagggagaggtcgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485562 True 200 lncRNA 0.51 1 66051173 66051372

Neighbor

gene id symbol gene type direction distance location
foxd2 LOC106613833 coding upstream 335306 65713466 ~ 65715867 (+)
foxe3 LOC106614014 coding upstream 345744 65703567 ~ 65705429 (+)
slc35a3a LOC106613831 coding upstream 373332 65661962 ~ 65677841 (+)
notch2 LOC106613830 coding upstream 389724 65604119 ~ 65661449 (+)
sec22bb LOC106613829 coding upstream 460425 65587136 ~ 65590748 (+)
znf692 LOC107695246 coding downstream 2592 66053964 ~ 66058160 (+)
fcho1 LOC106613838 coding downstream 7722 66059094 ~ 66106566 (+)
acsbg2 LOC106613839 coding downstream 132291 66183663 ~ 66210856 (+)
LOC118964639 NA coding downstream 189168 66240540 ~ 66248348 (+)
LOC110524376 LOC106613845 coding downstream 289209 66340581 ~ 66349235 (+)
G428625 NA non-coding upstream 5972 66044527 ~ 66045201 (+)
G428576 NA non-coding upstream 17050 65983251 ~ 66034123 (+)
G428578 NA non-coding upstream 22605 66025153 ~ 66028568 (+)
G428570 NA non-coding upstream 79491 65971450 ~ 65971682 (+)
G428449 NA non-coding upstream 200312 65850625 ~ 65850861 (+)
G428637 NA non-coding downstream 55761 66107133 ~ 66108885 (+)
G428669 NA non-coding downstream 58866 66110238 ~ 66110481 (+)
G428670 NA non-coding downstream 59615 66110987 ~ 66111208 (+)
G428671 NA non-coding downstream 60316 66111688 ~ 66111982 (+)
G427747 NA other upstream 529793 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 1022471 65024444 ~ 65028828 (+)
G427476 NA other upstream 1054035 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 1806644 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 1871787 64177028 ~ 64183138 (+)
G428696 NA other downstream 90707 66142079 ~ 66142605 (+)
G429156 NA other downstream 930577 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1409357 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 2051807 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 2161344 68212224 ~ 68214236 (+)

Expression


Co-expression Network