G428682


Basic Information

Item Value
gene id G428682
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66124377 ~ 66124658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485640
CTGGCAATTTTTCTGCGCTGGACTGCTCCAGGAGCTGCACAGCTTAGAAAGAACATTGGACAGGACACCTGTTGAGGGCTGCAGCCTCGCTCTCTGGCAGCGCCGGTTGCCCTAGACTAGACCACACCAGAGCAGTTCAGAGTTTGCAATGTGGTGTACGTACCTCACAGTGGTCCCTGTACAGGTTCTGCAACTTCTTCACATCGTTCATGTTGATGCGTTCAGGGAGGGGCTGGGTGCCCAGGTCAGGGATGGGGAACGGGGGCAGGACATGGGACACAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485640 True 282 lncRNA 0.56 1 66124377 66124658

Neighbor

gene id symbol gene type direction distance location
fcho1 LOC106613838 coding upstream 17811 66059094 ~ 66106566 (+)
znf692 LOC107695246 coding upstream 66217 66053964 ~ 66058160 (+)
foxd2 LOC106613833 coding upstream 408510 65713466 ~ 65715867 (+)
foxe3 LOC106614014 coding upstream 418948 65703567 ~ 65705429 (+)
slc35a3a LOC106613831 coding upstream 446536 65661962 ~ 65677841 (+)
acsbg2 LOC106613839 coding downstream 59005 66183663 ~ 66210856 (+)
LOC118964639 NA coding downstream 115882 66240540 ~ 66248348 (+)
LOC110524376 LOC106613845 coding downstream 215923 66340581 ~ 66349235 (+)
mob3a LOC106613847 coding downstream 224915 66349573 ~ 66355573 (+)
mknk2b LOC106613848 coding downstream 240861 66365519 ~ 66383789 (+)
G428676 NA non-coding upstream 4215 66118475 ~ 66120162 (+)
G428675 NA non-coding upstream 8069 66116093 ~ 66116308 (+)
G428673 NA non-coding upstream 9968 66113824 ~ 66114409 (+)
G428671 NA non-coding upstream 12395 66111688 ~ 66111982 (+)
G428670 NA non-coding upstream 13169 66110987 ~ 66111208 (+)
G428683 NA non-coding downstream 690 66125348 ~ 66125600 (+)
G428686 NA non-coding downstream 3998 66128656 ~ 66129472 (+)
G428688 LOC106613840 non-coding downstream 7148 66131806 ~ 66132067 (+)
G428689 NA non-coding downstream 7782 66132440 ~ 66132655 (+)
G428690 NA non-coding downstream 9398 66134056 ~ 66134278 (+)
G427747 NA other upstream 602997 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 1095675 65024444 ~ 65028828 (+)
G427476 NA other upstream 1127239 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 1879848 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 1944991 64177028 ~ 64183138 (+)
G428696 NA other downstream 17421 66142079 ~ 66142605 (+)
G429156 NA other downstream 857291 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1336071 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 1978521 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 2088058 68212224 ~ 68214236 (+)

Expression


Co-expression Network