G428683


Basic Information

Item Value
gene id G428683
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66125348 ~ 66125600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485641
GGATGTGAGAGGTAGGGCTCACCTTTGTTTCTGGTGCACAGGCTGCTGTCTCATGGCCATGTACTGAGAGTCCTCTTGCAGTCTGTTGAGTGGGGAGTCTGGCTTCAGTCTAATGCCATAGTAGTGGTATTTGGAGTTGCCTCTGGAACAAACAGGAACATTAGGGGTTAATAAACAAATATTGTATTCAGCTTTGTAAGTCTTATCAGAATAAATActcaccatcaccacatcaaTCAATCCAACATtaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485641 True 253 lncRNA 0.43 1 66125348 66125600

Neighbor

gene id symbol gene type direction distance location
fcho1 LOC106613838 coding upstream 18782 66059094 ~ 66106566 (+)
znf692 LOC107695246 coding upstream 67188 66053964 ~ 66058160 (+)
foxd2 LOC106613833 coding upstream 409481 65713466 ~ 65715867 (+)
foxe3 LOC106614014 coding upstream 419919 65703567 ~ 65705429 (+)
slc35a3a LOC106613831 coding upstream 447507 65661962 ~ 65677841 (+)
acsbg2 LOC106613839 coding downstream 58063 66183663 ~ 66210856 (+)
LOC118964639 NA coding downstream 114940 66240540 ~ 66248348 (+)
LOC110524376 LOC106613845 coding downstream 214981 66340581 ~ 66349235 (+)
mob3a LOC106613847 coding downstream 223973 66349573 ~ 66355573 (+)
mknk2b LOC106613848 coding downstream 239919 66365519 ~ 66383789 (+)
G428682 NA non-coding upstream 690 66124377 ~ 66124658 (+)
G428676 NA non-coding upstream 5186 66118475 ~ 66120162 (+)
G428675 NA non-coding upstream 9040 66116093 ~ 66116308 (+)
G428673 NA non-coding upstream 10939 66113824 ~ 66114409 (+)
G428671 NA non-coding upstream 13366 66111688 ~ 66111982 (+)
G428686 NA non-coding downstream 3056 66128656 ~ 66129472 (+)
G428688 LOC106613840 non-coding downstream 6206 66131806 ~ 66132067 (+)
G428689 NA non-coding downstream 6840 66132440 ~ 66132655 (+)
G428690 NA non-coding downstream 8456 66134056 ~ 66134278 (+)
G428693 NA non-coding downstream 13225 66138825 ~ 66139279 (+)
G427747 NA other upstream 603968 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 1096646 65024444 ~ 65028828 (+)
G427476 NA other upstream 1128210 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 1880819 64243153 ~ 64244790 (+)
sac3d1 sac3d1 other upstream 1945962 64177028 ~ 64183138 (+)
G428696 NA other downstream 16479 66142079 ~ 66142605 (+)
G429156 NA other downstream 856349 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1335129 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 1977579 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 2087116 68212224 ~ 68214236 (+)

Expression


Co-expression Network