Gene
RNA
| Item | Value |
|---|---|
| gene id | G428690 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 66134056 ~ 66134278 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU485648 | True | 223 | lncRNA | 0.38 | 1 | 66134056 | 66134278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fcho1 | LOC106613838 | coding | upstream | 27490 | 66059094 ~ 66106566 (+) |
| znf692 | LOC107695246 | coding | upstream | 75896 | 66053964 ~ 66058160 (+) |
| foxd2 | LOC106613833 | coding | upstream | 418189 | 65713466 ~ 65715867 (+) |
| foxe3 | LOC106614014 | coding | upstream | 428627 | 65703567 ~ 65705429 (+) |
| slc35a3a | LOC106613831 | coding | upstream | 456215 | 65661962 ~ 65677841 (+) |
| acsbg2 | LOC106613839 | coding | downstream | 49385 | 66183663 ~ 66210856 (+) |
| LOC118964639 | NA | coding | downstream | 106262 | 66240540 ~ 66248348 (+) |
| LOC110524376 | LOC106613845 | coding | downstream | 206303 | 66340581 ~ 66349235 (+) |
| mob3a | LOC106613847 | coding | downstream | 215295 | 66349573 ~ 66355573 (+) |
| mknk2b | LOC106613848 | coding | downstream | 231241 | 66365519 ~ 66383789 (+) |
| G428689 | NA | non-coding | upstream | 1401 | 66132440 ~ 66132655 (+) |
| G428688 | LOC106613840 | non-coding | upstream | 1989 | 66131806 ~ 66132067 (+) |
| G428686 | NA | non-coding | upstream | 4584 | 66128656 ~ 66129472 (+) |
| G428683 | NA | non-coding | upstream | 8456 | 66125348 ~ 66125600 (+) |
| G428682 | NA | non-coding | upstream | 9398 | 66124377 ~ 66124658 (+) |
| G428693 | NA | non-coding | downstream | 4547 | 66138825 ~ 66139279 (+) |
| G428695 | NA | non-coding | downstream | 7356 | 66141634 ~ 66141927 (+) |
| G428700 | NA | non-coding | downstream | 15781 | 66150059 ~ 66150289 (+) |
| G428701 | NA | non-coding | downstream | 16367 | 66150645 ~ 66150849 (+) |
| G428710 | NA | non-coding | downstream | 23921 | 66158199 ~ 66158524 (+) |
| G427747 | NA | other | upstream | 612676 | 65453856 ~ 65521380 (+) |
| LOC110524338 | LOC106584398 | other | upstream | 1105354 | 65024444 ~ 65028828 (+) |
| G427476 | NA | other | upstream | 1136918 | 64992101 ~ 64997138 (+) |
| LOC110522985 | NA | other | upstream | 1889527 | 64243153 ~ 64244790 (+) |
| sac3d1 | sac3d1 | other | upstream | 1954670 | 64177028 ~ 64183138 (+) |
| G428696 | NA | other | downstream | 7801 | 66142079 ~ 66142605 (+) |
| G429156 | NA | other | downstream | 847671 | 66981949 ~ 67048164 (+) |
| LOC110524407 | LOC106613876 | other | downstream | 1326451 | 67458540 ~ 67464323 (+) |
| G430796 | LOC106613888 | other | downstream | 1968901 | 68103179 ~ 68103534 (+) |
| LOC110524423 | LOC106613476 | other | downstream | 2078438 | 68212224 ~ 68214236 (+) |
