G429274


Basic Information

Item Value
gene id G429274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66208978 ~ 66210854 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU486271
CTTGGTAAGCTAATAGTTTATTTACAGGTCTTCCTGAACATCAACATGGGTCTCCAGTTGAGCTTCTCTCTGAATATGGAAGCACTCTAACATCTCTGCAAACTGCAAGGGGTTTGACCTACTCACTTTCATCTGAGACAATGGCATGTTAGTGGCAATTGTTTACAACTGGGATCTTTGGATTTCATTAGTATTAGATGACTTTGTTTTAAACATTTCATCAAAAGATAAAGGTACTGGAAGCCAAAGTCTTAATCACAAATCAAATGAATTTCTTCCTACTACAATGTACCTGGGAGTATGTTTTGCAAGTACTGACTCAAAGGTTTGACAAATGGCCAAAATTCACAACCAGCAATAAGACACATAAGTCCAAGTTCTCCTAACATGTACAGCAGGTAGCAGAGATACATGGTTTTCACAATTCCACTCAGCATGCATATATGTGTGTTTAGGGAGAGTATTTGCAATGTAATAAGAGTGAACACCAGTCCACACCGGTCTTAGGTAAGATTGTATCTATGTTTCAGGATGACTGCTTATTTTGAAATGCTATTCAATTCTCGTTTAGATTAGTTACCCCAGAGAACATAATGAACCGGTtttcagaaagacaaattcaGTGGTGCAAGGACCAAACTCTTTTCTCATCACACGCGTCTGCGTTGTGCTGGTATGCATGAGGAAAGTGGTGGCTCTCACACTTCAAGACAAGACTGATCTGTAGACTAACACGTTCTCTGATGAAGACCAGAGAAGAGGAAATAAGCAAAACATATTTACAGTATTTAAATGGTCACAGCAATTTTACACAATCGTTACAAAACATCCCAACAAGACCAGGCAATTGCGTAGGCTGTGTCACACAGACGATCAGAGTCCGTAAAACTCATTGGATATAAAACATGACTAAACTAATATGGCTTGAATGATATGGTTCTGTAGCATAAAGATCTGGATGCTCTCTCTCAGATAAGGTAGGTGCAGAAGCTCAAAATTGTGCCATGTGCTTATGGCGCCAAGGAATCAACTAAATCTACAACTTAATTTTCATTGGTCGTCCCAGGGCTTGTCTTGTGTATTTATTGCAGAACTGCACTATTTAGGAGCTACTACACAATGATAGACGCACTTTCATCAAAACTCAAACCAGACAGAGAAAAACAATACAATAAATAGAACAATGAtatgttcagtgttttctttccctgTCATTTTacttcatattttatttttaatccagaCCAGGGATCACTGGATGTAATCATTATTTATCATCCAAATGTGTGTATTTGGTCCAAGTAATTTCTGACTTTGGCAAAACAAAAATAGTAACACTTAACCCCCAAAATTCTACTACCATGTCCTATGGACTTTTTGGATTCTATGCAATTTATTTGCAAGTATCACAGTAAATTCACAAAGCCTCATCACATACACCTGTACTTCATCTATCATATGTTATTGTTCTTCATcacaataatacaaaataaatagcTGAAATCAGCATATCAACAactcatctttaaaaaaaaaatcctaaaggCTTACAATGGCTTCTCATGGATGacACCCACAAATGTAAACAAAACCCAATAATGAAAGGAGGAAGCTAGCAAAACATGttcacaggagagaaacaggaactgAACAAGGAGTGGTTGTCTTAGACTGTTCTGTCTGCATGTCTTTTGTAGTGTTTCTCTGAATTGCTCTGCAGGGGTATTTTTGTCCAATGCCTATTTGGGGGGCATGGAGTTATCAGGGGTGCTTGGGGTCACCACCTCCTTGTAGAAATTCTCTACTTGCTCTTTGTACATCTTCATGACCACCGGCCTCTTCAGCTTCATAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486271 True 1852 lncRNA 0.38 2 66208978 66210854

Neighbor

gene id symbol gene type direction distance location
rfx2 LOC106613840 coding downstream 33855 66106837 ~ 66175123 (-)
LOC110524366 LOC106613835 coding downstream 158780 66045863 ~ 66050198 (-)
trabd2b LOC106613834 coding downstream 249718 65864618 ~ 65959260 (-)
fam78bb LOC106613832 coding downstream 527006 65678114 ~ 65681972 (-)
LOC110524355 edem3 coding downstream 637805 65551345 ~ 65571173 (-)
mllt1a LOC106613842 coding upstream 2643 66213497 ~ 66241138 (-)
acer1 acer1 coding upstream 33526 66244380 ~ 66249228 (-)
myo1f LOC100380684 coding upstream 42856 66253710 ~ 66283455 (-)
adamts10 LOC106613844 coding upstream 70873 66281727 ~ 66335345 (-)
LOC118964532 LOC106614015 coding upstream 178169 66389023 ~ 66391922 (-)
G429255 NA non-coding downstream 31924 66176799 ~ 66177054 (-)
G429240 NA non-coding downstream 45294 66163445 ~ 66163684 (-)
G429247 NA non-coding downstream 72582 66136148 ~ 66136396 (-)
G429244 NA non-coding downstream 85367 66123061 ~ 66123611 (-)
G429342 NA non-coding upstream 146679 66357533 ~ 66357785 (-)
G429348 NA non-coding upstream 154584 66365438 ~ 66366434 (-)
G429304 LOC106613848 non-coding upstream 168866 66379720 ~ 66383789 (-)
G429419 NA non-coding upstream 270450 66481304 ~ 66482287 (-)
G429395 NA non-coding upstream 278701 66489555 ~ 66489780 (-)
G428132 NA other downstream 826388 65370116 ~ 65382590 (-)
G427902 ubxn6 other downstream 1197380 64999708 ~ 65011598 (-)
LOC110524332 LOC106613803 other downstream 1297980 64903039 ~ 64911196 (-)
LOC110524330 LOC106613802 other downstream 1476006 64701867 ~ 64810664 (-)
G427287 NA other downstream 1640598 64566681 ~ 64568380 (-)
LOC110524398 LOC106613863 other upstream 576197 66786837 ~ 66793995 (-)
lrrc7 LOC106613881 other upstream 1599751 67810595 ~ 67983549 (-)
bend5 LOC106584333 other upstream 2129350 68331871 ~ 68352828 (-)
G432310 LOC106613894 other upstream 2488967 68699821 ~ 68707448 (-)
G432338 NA other upstream 2539363 68748558 ~ 68755057 (-)

Expression


Co-expression Network