G428763


Basic Information

Item Value
gene id G428763
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66268550 ~ 66295412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485723
CGGTTAAGGGTGTTTCTGGTGAAATCACAGAATATGATATTGAAACAATCACAGCGAAATTGTTGATTATGTAAACTTTTCAAAAAGATAAATATCCCAAACCATACATTAGTTTCATCCGGactggattacacacacacatataatgcTTTTTTTCACACAAAGAATGAATTAAGTCCCGAATGTGCAGTAAAATATGTGCTAAAAACACGGAAGTGTGCTGTTGAGTCACAAAGTGGATCCAAAAGAGGAACAGTGCAGTCCTATTATTGCATACATTCATGTGTGTCTGCGCATGTGAAGAAGTTGAGTGAGTACATATGTGTGGTAGGGGGATGAGGCAAGGATGGTATGTATGTTTGTTATTGTGTTGTTGCTACTGTATGAGTGCAAACATCAGCTGTGCTCACGAATGATATAGAATGGAAGAACCTAATGCTATGGGCCAGTGGAATGACCTCAATGACCTCAATTCTCAAACGGTTTAAAAGCCATTTGTAACAgttttttgtttgtgtgtatgtgtgtatgtgtgtatgtgtgtatgcctaTAAATACATCCGTCTGAAAGTGTGTGAGGGGGCAGGTCTGCTCTATTTCTTCTGAAGAGACATTTGTGAGAAGTGATGAAGGTCCCTAACAGACAATGAAACAGGATACGAAGATGTAGTCATCCATGTATCTCTTCTTCAGGTTCTCCACGATGGCGTCTTCGCTGATCTTGGACAGTAGCACCATGTCGTCCACACCACTCTGCTTGACATTCTGACTCTGCCAGTGATACTTACTGCCcaTCGTGCCGGCGGTGCGTGTGCCCCTCTTCTCCCACGGTCCTGGACCAGGTGTTCAAAGTCCAGACTGTGTGTGTCGGTAATCCCACACTAGCCCCTTCACAGCACGACCATCACAGTCAGGAAGTCTCcagcacacacagacacacacacacacacacacagaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485723 True 959 lncRNA 0.43 3 66268550 66295412

Neighbor

gene id symbol gene type direction distance location
LOC118964639 NA coding upstream 20202 66240540 ~ 66248348 (+)
acsbg2 LOC106613839 coding upstream 57694 66183663 ~ 66210856 (+)
fcho1 LOC106613838 coding upstream 161984 66059094 ~ 66106566 (+)
znf692 LOC107695246 coding upstream 210390 66053964 ~ 66058160 (+)
foxd2 LOC106613833 coding upstream 552683 65713466 ~ 65715867 (+)
LOC110524376 LOC106613845 coding downstream 45169 66340581 ~ 66349235 (+)
mob3a LOC106613847 coding downstream 54161 66349573 ~ 66355573 (+)
mknk2b LOC106613848 coding downstream 70107 66365519 ~ 66383789 (+)
rexo1 LOC106613849 coding downstream 105684 66401096 ~ 66412427 (+)
LOC110524380 LOC106614016 coding downstream 134859 66430271 ~ 66433596 (+)
G428720 NA non-coding upstream 97337 66170987 ~ 66171213 (+)
G428717 NA non-coding upstream 101661 66166625 ~ 66166889 (+)
G428710 NA non-coding upstream 110026 66158199 ~ 66158524 (+)
G428701 NA non-coding upstream 117701 66150645 ~ 66150849 (+)
G428700 NA non-coding upstream 118261 66150059 ~ 66150289 (+)
G428804 NA non-coding downstream 12158 66307570 ~ 66309460 (+)
G428805 NA non-coding downstream 15405 66310817 ~ 66311746 (+)
G428822 NA non-coding downstream 35501 66330913 ~ 66331460 (+)
G428841 NA non-coding downstream 68141 66363553 ~ 66363813 (+)
G428912 NA non-coding downstream 202948 66498360 ~ 66498598 (+)
G428696 NA other upstream 125945 66142079 ~ 66142605 (+)
G427747 NA other upstream 747170 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 1239848 65024444 ~ 65028828 (+)
G427476 NA other upstream 1271412 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 2024021 64243153 ~ 64244790 (+)
G429156 NA other downstream 686537 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1165317 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 1807767 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 1917304 68212224 ~ 68214236 (+)
G434653 NA other downstream 4664198 70959610 ~ 70959932 (+)

Expression


Co-expression Network