G428805


Basic Information

Item Value
gene id G428805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66310817 ~ 66311746 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485767
GCTAAAACGCTGCACGCTTTTTTTAATGAACTATCCTTGGCTGTCTGAGCCGAGCCCGATGGTCTGCTAGAGGTGTCCAACTACAGGacagacggaaagagagaggcagcagagaggagagaggaaagagcaagagagagggggaaagaaagcaGAATAGAGGGAGAAATAGGGAGGAATgtagaaagagagtgagtgagtagagAGAAGGGGGCTGGGATGTGTGATATGGCCCTAACGCAGGGCAGACTGTGGCACAACTCGTATTTTAACAGCTGCAAGGGATTTCCATTGTAAAATCAGCTGACTTGATGAAAGGAGCACTTGTTGCCTGGAGTTGGAGAGGGCCCCTCTGTAAGCCATTATGTTATTGGACTGGTAGATTAAAAGCAGCTATGTCGTCGAAAGTATTTATCTTTCGCATCCAGAGCAGCGCTCATCAAGCACAGGAATTCTAGCCAGACAGGAGATTGTCTGCAGCTTtcccctctcctcgtctctccccttctcctctcttcttttcagctctcccctcttccctttctGGGCCCACGGTCTGGCAGcactctcccctcttccctttctGGGCCCACGGTCTGGCAGCActctcccctcttccctttctGGGCCCACGGTCTGGCAGCACTCTCCTGCTCagctctcccctcttccctttctGGGCCCATGGTCTGGCAGCACTCTCCTGCTCAGCTCTCCCCATGTGCTGCTGCACTATTCACTCTCTGTGAACTCCCAGGCAGATGTGTCAGCTTTCTCCATATCTGCAGACTGTCTACAGACGTTTTCAACCTGAAATGACCACCGAGCAGACAGTGTAGTTACCTCTGTAATGAtgtatcccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485767 True 864 lncRNA 0.52 2 66310817 66311746

Neighbor

gene id symbol gene type direction distance location
LOC118964639 NA coding upstream 62469 66240540 ~ 66248348 (+)
acsbg2 LOC106613839 coding upstream 99961 66183663 ~ 66210856 (+)
fcho1 LOC106613838 coding upstream 204251 66059094 ~ 66106566 (+)
znf692 LOC107695246 coding upstream 252657 66053964 ~ 66058160 (+)
foxd2 LOC106613833 coding upstream 594950 65713466 ~ 65715867 (+)
LOC110524376 LOC106613845 coding downstream 28835 66340581 ~ 66349235 (+)
mob3a LOC106613847 coding downstream 37827 66349573 ~ 66355573 (+)
mknk2b LOC106613848 coding downstream 53773 66365519 ~ 66383789 (+)
rexo1 LOC106613849 coding downstream 89350 66401096 ~ 66412427 (+)
LOC110524380 LOC106614016 coding downstream 118525 66430271 ~ 66433596 (+)
G428804 NA non-coding upstream 1357 66307570 ~ 66309460 (+)
G428763 NA non-coding upstream 15405 66268550 ~ 66295412 (+)
G428720 NA non-coding upstream 139604 66170987 ~ 66171213 (+)
G428717 NA non-coding upstream 143928 66166625 ~ 66166889 (+)
G428710 NA non-coding upstream 152293 66158199 ~ 66158524 (+)
G428822 NA non-coding downstream 19167 66330913 ~ 66331460 (+)
G428841 NA non-coding downstream 51807 66363553 ~ 66363813 (+)
G428912 NA non-coding downstream 186614 66498360 ~ 66498598 (+)
G428918 NA non-coding downstream 194533 66506279 ~ 66506618 (+)
G428922 NA non-coding downstream 198156 66509902 ~ 66510264 (+)
G428696 NA other upstream 168212 66142079 ~ 66142605 (+)
G427747 NA other upstream 789437 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 1282115 65024444 ~ 65028828 (+)
G427476 NA other upstream 1313679 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 2066288 64243153 ~ 64244790 (+)
G429156 NA other downstream 670203 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 1148983 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 1791433 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 1900970 68212224 ~ 68214236 (+)
G434653 NA other downstream 4647864 70959610 ~ 70959932 (+)

Expression


Co-expression Network