G429419


Basic Information

Item Value
gene id G429419
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66481304 ~ 66482287 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU486436
TGTATAACCAAAGCACTCACAGTATAGCCAGGGGTTAAATTAGGAGGAAAGGAAGTGGAAAAGAGTTCTACCACCTCCCTCAATAGCAGACAGCACATAGTGGAAATCAAAtagatttatgataaaaatgaTCATGGGAAAACAACGTTGGAGACAGTTCTACTACATGAAACTTCTCAATTTAACCCAATGAATTAACCACTTAATTTAGCTCCATTCGTGTCTAGTAAAACACATTTTCAATTATATCTATATTGCTCTTTTCAGTTTGAGATGTTTATGAAAATGTTCACACATAGCTGCTATTGATATTGTCCGTTTTTTttagcaaccctaaccctaacctcatgTTGACTTTTCCAGAAAAAGCTAACATCTATGACTGATCTCATTAAAACAATACATTCTGGGTCACTTGGCCTTGACTCATAACCACAATGACACAAGCGTACAGTATACTACCTAAAAGGGTGAAGTGATACAGCAGTCTTTTGTAACAGGGaatatacactaagtgtacaaaacattaggaactaaTATTGAgtgcacccccctccccctcagaacagcctcaattcgtcagggtatggtctctacaaggtgtcgaaagcgttccacagggatactgtctaatgttgactccaatgcttcgcacagttgtgtcaagttggctggattctttgggtggtgggccattcttgatacacatgggaaactgttgaggatGAAAAATCTAGCAACGTTTtagttcttgacacattcaaaccggtgcgcctggcacctactaccataccccgttcaaatgcacatacatattttgtcttgcccattgccctctgaatggcatacatacacaatccatgtctcaaggcttaaaaatccttctctaaatggtctcctccccttcatctacactgattgaagtggatttaacaagtgacatcaataagggatcatagctttcacctggtcagtctgtcatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486436 True 984 lncRNA 0.40 1 66481304 66482287

Neighbor

gene id symbol gene type direction distance location
LOC118964532 LOC106614015 coding downstream 89382 66389023 ~ 66391922 (-)
adamts10 LOC106613844 coding downstream 145959 66281727 ~ 66335345 (-)
myo1f LOC100380684 coding downstream 197849 66253710 ~ 66283455 (-)
acer1 acer1 coding downstream 232076 66244380 ~ 66249228 (-)
mllt1a LOC106613842 coding downstream 240166 66213497 ~ 66241138 (-)
LOC110524386 NA coding upstream 32186 66514473 ~ 66521372 (-)
LOC110524385 NA coding upstream 172204 66653328 ~ 66659138 (-)
LOC110524389 LOC106584359 coding upstream 184250 66666537 ~ 66676709 (-)
LOC110524390 LOC106613856 coding upstream 238475 66720762 ~ 66736749 (-)
LOC118964717 LOC106584253 coding upstream 269839 66752126 ~ 66764500 (-)
G429304 LOC106613848 non-coding downstream 97515 66379720 ~ 66383789 (-)
G429348 NA non-coding downstream 114870 66365438 ~ 66366434 (-)
G429342 NA non-coding downstream 123519 66357533 ~ 66357785 (-)
G429274 NA non-coding downstream 270450 66208978 ~ 66210854 (-)
G429255 NA non-coding downstream 304250 66176799 ~ 66177054 (-)
G429395 NA non-coding upstream 7268 66489555 ~ 66489780 (-)
G429421 NA non-coding upstream 11145 66493432 ~ 66493633 (-)
G429457 NA non-coding upstream 61506 66543793 ~ 66544061 (-)
G428132 NA other downstream 1098714 65370116 ~ 65382590 (-)
G427902 ubxn6 other downstream 1469706 64999708 ~ 65011598 (-)
LOC110524332 LOC106613803 other downstream 1570306 64903039 ~ 64911196 (-)
LOC110524330 LOC106613802 other downstream 1748332 64701867 ~ 64810664 (-)
G427287 NA other downstream 1912924 64566681 ~ 64568380 (-)
LOC110524398 LOC106613863 other upstream 304764 66786837 ~ 66793995 (-)
lrrc7 LOC106613881 other upstream 1328318 67810595 ~ 67983549 (-)
bend5 LOC106584333 other upstream 1857917 68331871 ~ 68352828 (-)
G432310 LOC106613894 other upstream 2217534 68699821 ~ 68707448 (-)
G432338 NA other upstream 2267930 68748558 ~ 68755057 (-)

Expression


Co-expression Network