G428912


Basic Information

Item Value
gene id G428912
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66498360 ~ 66498598 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485886
gatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatgtctttcttcttgccactcttccataaaggccagatttgtgcaatattcgactgattgttgtcctatggacagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485886 True 239 lncRNA 0.41 1 66498360 66498598

Neighbor

gene id symbol gene type direction distance location
LOC110524383 LOC106613850 coding upstream 8287 66482562 ~ 66490073 (+)
csnk1g2b csnk1g2 coding upstream 17774 66434671 ~ 66480586 (+)
LOC110524380 LOC106614016 coding upstream 64764 66430271 ~ 66433596 (+)
rexo1 LOC106613849 coding upstream 85933 66401096 ~ 66412427 (+)
mknk2b LOC106613848 coding upstream 114571 66365519 ~ 66383789 (+)
LOC110524384 LOC106613851 coding downstream 21239 66519837 ~ 66634272 (+)
osbpl1a LOC106613854 coding downstream 178230 66676828 ~ 66704143 (+)
LOC110524391 LOC106613857 coding downstream 270416 66769014 ~ 66776718 (+)
LOC110524392 LOC106613859 coding downstream 278220 66776818 ~ 66785521 (+)
LOC110524394 LOC106613862 coding downstream 294024 66792622 ~ 66800072 (+)
G428841 NA non-coding upstream 134547 66363553 ~ 66363813 (+)
G428822 NA non-coding upstream 166900 66330913 ~ 66331460 (+)
G428805 NA non-coding upstream 186614 66310817 ~ 66311746 (+)
G428804 NA non-coding upstream 188900 66307570 ~ 66309460 (+)
G428763 NA non-coding upstream 202948 66268550 ~ 66295412 (+)
G428918 NA non-coding downstream 7681 66506279 ~ 66506618 (+)
G428922 NA non-coding downstream 11304 66509902 ~ 66510264 (+)
G428857 NA non-coding downstream 158137 66656735 ~ 66658029 (+)
G428992 NA non-coding downstream 172647 66671245 ~ 66697999 (+)
G429001 NA non-coding downstream 208949 66707547 ~ 66707778 (+)
G428696 NA other upstream 355755 66142079 ~ 66142605 (+)
G427747 NA other upstream 976980 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 1469658 65024444 ~ 65028828 (+)
G427476 NA other upstream 1501222 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 2253831 64243153 ~ 64244790 (+)
G429156 NA other downstream 483351 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 962131 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 1604581 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 1714118 68212224 ~ 68214236 (+)
G434653 NA other downstream 4461012 70959610 ~ 70959932 (+)

Expression


Co-expression Network