Gene
RNA
| Item | Value |
|---|---|
| gene id | G428992 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 66671245 ~ 66697999 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU485975 | True | 212 | lncRNA | 0.45 | 2 | 66671245 | 66697999 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524384 | LOC106613851 | coding | upstream | 36973 | 66519837 ~ 66634272 (+) |
| LOC110524383 | LOC106613850 | coding | upstream | 181172 | 66482562 ~ 66490073 (+) |
| csnk1g2b | csnk1g2 | coding | upstream | 190659 | 66434671 ~ 66480586 (+) |
| LOC110524380 | LOC106614016 | coding | upstream | 237649 | 66430271 ~ 66433596 (+) |
| rexo1 | LOC106613849 | coding | upstream | 258818 | 66401096 ~ 66412427 (+) |
| LOC110524391 | LOC106613857 | coding | downstream | 71015 | 66769014 ~ 66776718 (+) |
| LOC110524392 | LOC106613859 | coding | downstream | 78819 | 66776818 ~ 66785521 (+) |
| LOC110524394 | LOC106613862 | coding | downstream | 94623 | 66792622 ~ 66800072 (+) |
| pigx | pigx | coding | downstream | 102443 | 66800442 ~ 66812587 (+) |
| pak2b | pak2 | coding | downstream | 114880 | 66812879 ~ 66839267 (+) |
| G428857 | NA | non-coding | upstream | 13216 | 66656735 ~ 66658029 (+) |
| G428922 | NA | non-coding | upstream | 160981 | 66509902 ~ 66510264 (+) |
| G428918 | NA | non-coding | upstream | 164627 | 66506279 ~ 66506618 (+) |
| G428912 | NA | non-coding | upstream | 172647 | 66498360 ~ 66498598 (+) |
| G428841 | NA | non-coding | upstream | 307432 | 66363553 ~ 66363813 (+) |
| G429001 | NA | non-coding | downstream | 9548 | 66707547 ~ 66707778 (+) |
| G429028 | NA | non-coding | downstream | 55236 | 66753235 ~ 66753453 (+) |
| rpp21 | rp21 | non-coding | downstream | 142698 | 66840697 ~ 66884634 (+) |
| G429102 | NA | non-coding | downstream | 188184 | 66886183 ~ 66886424 (+) |
| G428696 | NA | other | upstream | 528640 | 66142079 ~ 66142605 (+) |
| G427747 | NA | other | upstream | 1149865 | 65453856 ~ 65521380 (+) |
| LOC110524338 | LOC106584398 | other | upstream | 1642543 | 65024444 ~ 65028828 (+) |
| G427476 | NA | other | upstream | 1674107 | 64992101 ~ 64997138 (+) |
| LOC110522985 | NA | other | upstream | 2426716 | 64243153 ~ 64244790 (+) |
| G429156 | NA | other | downstream | 283950 | 66981949 ~ 67048164 (+) |
| LOC110524407 | LOC106613876 | other | downstream | 762730 | 67458540 ~ 67464323 (+) |
| G430796 | LOC106613888 | other | downstream | 1405180 | 68103179 ~ 68103534 (+) |
| LOC110524423 | LOC106613476 | other | downstream | 1514717 | 68212224 ~ 68214236 (+) |
| G434653 | NA | other | downstream | 4261611 | 70959610 ~ 70959932 (+) |
