G429001


Basic Information

Item Value
gene id G429001
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66707547 ~ 66707778 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU485984
ctatgagactcaaaattgagctcaggtgcatcctgtttccattgatcatccttgagtagtttctacaacttgattggattccacctgtggtaaattcaattgattggacatgatttggaaaaatacacacctgtctatataaggtcccacagttgacagtgcacgtcagagcaaaaaaccaagccacaaggtcgaaggaattgtccgtagagctcagagtcAGGATTGTGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485984 True 232 lncRNA 0.42 1 66707547 66707778

Neighbor

gene id symbol gene type direction distance location
osbpl1a LOC106613854 coding upstream 3404 66676828 ~ 66704143 (+)
LOC110524384 LOC106613851 coding upstream 73275 66519837 ~ 66634272 (+)
LOC110524383 LOC106613850 coding upstream 217474 66482562 ~ 66490073 (+)
csnk1g2b csnk1g2 coding upstream 226961 66434671 ~ 66480586 (+)
LOC110524380 LOC106614016 coding upstream 273951 66430271 ~ 66433596 (+)
LOC110524391 LOC106613857 coding downstream 61236 66769014 ~ 66776718 (+)
LOC110524392 LOC106613859 coding downstream 69040 66776818 ~ 66785521 (+)
LOC110524394 LOC106613862 coding downstream 84844 66792622 ~ 66800072 (+)
pigx pigx coding downstream 92664 66800442 ~ 66812587 (+)
pak2b pak2 coding downstream 105101 66812879 ~ 66839267 (+)
G428992 NA non-coding upstream 9548 66671245 ~ 66697999 (+)
G428857 NA non-coding upstream 49518 66656735 ~ 66658029 (+)
G428922 NA non-coding upstream 197283 66509902 ~ 66510264 (+)
G428918 NA non-coding upstream 200929 66506279 ~ 66506618 (+)
G428912 NA non-coding upstream 208949 66498360 ~ 66498598 (+)
G429028 NA non-coding downstream 45457 66753235 ~ 66753453 (+)
rpp21 rp21 non-coding downstream 132919 66840697 ~ 66884634 (+)
G429102 NA non-coding downstream 178405 66886183 ~ 66886424 (+)
G429103 NA non-coding downstream 179882 66887660 ~ 66887884 (+)
G428696 NA other upstream 564942 66142079 ~ 66142605 (+)
G427747 NA other upstream 1186167 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 1678845 65024444 ~ 65028828 (+)
G427476 NA other upstream 1710409 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 2463018 64243153 ~ 64244790 (+)
G429156 NA other downstream 274171 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 752951 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 1395401 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 1504938 68212224 ~ 68214236 (+)
G434653 NA other downstream 4251832 70959610 ~ 70959932 (+)

Expression


Co-expression Network