G429572



Basic Information


Item Value
gene id G429572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66741070 ~ 66741457 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU486611
gatatggatgaaaatatcctcaaattaaagctgaccgtCTGCACCATAACCTAATTACATTGTATCATTTGAAATCCaatgtgctggagtacagagccaacatgaacaaaacatttaactgtcccaatactttcggAGCTCACTATATGTAATAGaaagacactctctctctgtgcattAACAATTTACTTCACTAGAGGATACTGCAGTGCTCTCATTACTGTGTCATTCACACTCTTTTGGGGTTCAAGGCAATGTTTTCTAAATGTTTTATGAATTGAACATTAACATGTTTTCAATTACAGTGAGAGTGACTTTGGTGTATTTTATGAATTAACAGGAAAAATATCTTCATCAAGATGAGCTGGCACACAAGTCAACCCTAGTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU486611 True 388 lncRNA 0.36 1 66741070 66741457

Neighbor


gene id symbol gene type direction distance location
LOC110524390 LOC106613856 coding downstream 4321 66720762 ~ 66736749 (-)
LOC110524389 LOC106584359 coding downstream 64361 66666537 ~ 66676709 (-)
LOC110524385 NA coding downstream 81932 66653328 ~ 66659138 (-)
LOC110524386 NA coding downstream 219698 66514473 ~ 66521372 (-)
LOC118964532 LOC106614015 coding downstream 349148 66389023 ~ 66391922 (-)
LOC118964717 LOC106584253 coding upstream 10669 66752126 ~ 66764500 (-)
LOC110524398 LOC106613863 coding upstream 45380 66786837 ~ 66793995 (-)
cep19 cep19 coding upstream 58171 66799628 ~ 66801724 (-)
aqp12 LOC106613865 coding upstream 142232 66883689 ~ 66885402 (-)
ankmy1 ankmy1 coding upstream 314202 66978887 ~ 67068645 (-)
G429565 NA non-coding downstream 2937 66729360 ~ 66738133 (-)
G429563 NA non-coding downstream 20533 66720321 ~ 66720537 (-)
G429556 NA non-coding downstream 32155 66708275 ~ 66708915 (-)
G429457 NA non-coding downstream 197009 66543793 ~ 66544061 (-)
G429574 NA non-coding upstream 3431 66744888 ~ 66748852 (-)
G429588 NA non-coding upstream 13668 66755125 ~ 66755342 (-)
G429593 NA non-coding upstream 19923 66761380 ~ 66761635 (-)
G429599 NA non-coding upstream 26236 66767693 ~ 66767896 (-)
G429583 NA non-coding upstream 43480 66784937 ~ 66785490 (-)
G428132 NA other downstream 1358480 65370116 ~ 65382590 (-)
G427902 ubxn6 other downstream 1729472 64999708 ~ 65011598 (-)
LOC110524332 LOC106613803 other downstream 1830072 64903039 ~ 64911196 (-)
LOC110524330 LOC106613802 other downstream 2008098 64701867 ~ 64810664 (-)
G427287 NA other downstream 2172690 64566681 ~ 64568380 (-)
lrrc7 LOC106613881 other upstream 1069148 67810595 ~ 67983549 (-)
bend5 LOC106584333 other upstream 1598747 68331871 ~ 68352828 (-)
G432310 LOC106613894 other upstream 1958364 68699821 ~ 68707448 (-)
G432338 NA other upstream 2008760 68748558 ~ 68755057 (-)

Expression



Co-expression Network