G429028


Basic Information

Item Value
gene id G429028
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66753235 ~ 66753453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU486016
gccatgttctgttataatcgccacccggcacagccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctaggttctggcttttctagggagtttttcctagccactgtgcatctacacctgcattgcttgctgtttggggttttaggctgggtttcagtacagcactttgagatatcagctgatgtacgaagggctttata

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486016 True 219 lncRNA 0.49 1 66753235 66753453

Neighbor

gene id symbol gene type direction distance location
osbpl1a LOC106613854 coding upstream 49092 66676828 ~ 66704143 (+)
LOC110524384 LOC106613851 coding upstream 118963 66519837 ~ 66634272 (+)
LOC110524383 LOC106613850 coding upstream 263162 66482562 ~ 66490073 (+)
csnk1g2b csnk1g2 coding upstream 272649 66434671 ~ 66480586 (+)
LOC110524380 LOC106614016 coding upstream 319639 66430271 ~ 66433596 (+)
LOC110524391 LOC106613857 coding downstream 15561 66769014 ~ 66776718 (+)
LOC110524392 LOC106613859 coding downstream 23365 66776818 ~ 66785521 (+)
LOC110524394 LOC106613862 coding downstream 39169 66792622 ~ 66800072 (+)
pigx pigx coding downstream 46989 66800442 ~ 66812587 (+)
pak2b pak2 coding downstream 59426 66812879 ~ 66839267 (+)
G429001 NA non-coding upstream 45457 66707547 ~ 66707778 (+)
G428992 NA non-coding upstream 55236 66671245 ~ 66697999 (+)
G428857 NA non-coding upstream 95206 66656735 ~ 66658029 (+)
G428922 NA non-coding upstream 242971 66509902 ~ 66510264 (+)
G428918 NA non-coding upstream 246617 66506279 ~ 66506618 (+)
rpp21 rp21 non-coding downstream 87244 66840697 ~ 66884634 (+)
G429102 NA non-coding downstream 132730 66886183 ~ 66886424 (+)
G429103 NA non-coding downstream 134207 66887660 ~ 66887884 (+)
G429767 NA non-coding downstream 318338 67071791 ~ 67072079 (+)
G428696 NA other upstream 610630 66142079 ~ 66142605 (+)
G427747 NA other upstream 1231855 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 1724533 65024444 ~ 65028828 (+)
G427476 NA other upstream 1756097 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 2508706 64243153 ~ 64244790 (+)
G429156 NA other downstream 228496 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 707276 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 1349726 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 1459263 68212224 ~ 68214236 (+)
G434653 NA other downstream 4206157 70959610 ~ 70959932 (+)

Expression


Co-expression Network