G429865


Basic Information

Item Value
gene id G429865
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 67199597 ~ 67251340 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU486925
aaagcatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaagcctgtaattttcatcataggtacacttcaactatgacagacaaaatgagaagaaaatcacattgtaggattttttattaatttatttgcaaatgatggtggaaaataagtatttggtcaataacaaaagtttctcaatactttgttatataccctttgttgacaatgacagaggtcaaacgttttctgtaagtcttcacaaggttttcacacactgcagcagggattttggcccactcctccatacagaccttctccagatccttcaggtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486925 True 329 lncRNA 0.36 2 67199597 67251340

Neighbor

gene id symbol gene type direction distance location
LOC110524403 LOC106613871 coding upstream 141921 67003157 ~ 67057676 (+)
trnaa-ugc-14 NA coding upstream 159480 67040047 ~ 67040117 (+)
gpc5b LOC106613866 coding upstream 212275 66891208 ~ 66987322 (+)
rpp21 rp21 coding upstream 315569 66840697 ~ 66884634 (+)
trnav-aac-9 NA coding upstream 325636 66873889 ~ 66873961 (+)
LOC110524406 LOC106613873 coding downstream 174987 67426327 ~ 67449696 (+)
LOC110524407 LOC106613876 coding downstream 207200 67458540 ~ 67464323 (+)
fxr1 fxr1 coding downstream 239813 67491153 ~ 67511405 (+)
LOC110524410 NA coding downstream 266072 67517412 ~ 67649527 (+)
sox2 sox2 coding downstream 370931 67622271 ~ 67624355 (+)
G429771 NA non-coding upstream 125722 67073675 ~ 67073875 (+)
G429767 NA non-coding upstream 127518 67071791 ~ 67072079 (+)
G429103 NA non-coding upstream 311713 66887660 ~ 66887884 (+)
G429102 NA non-coding upstream 313173 66886183 ~ 66886424 (+)
G430169 NA non-coding downstream 113352 67364692 ~ 67365900 (+)
G430260 NA non-coding downstream 166390 67417730 ~ 67418494 (+)
G430268 NA non-coding downstream 171202 67422542 ~ 67422889 (+)
G430271 NA non-coding downstream 172370 67423710 ~ 67423993 (+)
G430279 NA non-coding downstream 176450 67427790 ~ 67428173 (+)
G429156 NA other upstream 151433 66981949 ~ 67048164 (+)
G428696 NA other upstream 1056992 66142079 ~ 66142605 (+)
G427747 NA other upstream 1678217 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 2170895 65024444 ~ 65028828 (+)
G427476 NA other upstream 2202459 64992101 ~ 64997138 (+)
G430796 LOC106613888 other downstream 851839 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 961376 68212224 ~ 68214236 (+)
G434653 NA other downstream 3708270 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 3967449 71218789 ~ 71223578 (+)

Expression


Co-expression Network