G430268


Basic Information

Item Value
gene id G430268
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 67422542 ~ 67422889 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU487339
gtatgattcatcactccaaagaacacATTTCCAAGGCTCCATAGTCCAATGGCAGGGagctttacaacactccagcCGACGCAGCCGATGGTGAAATTAGGCTTGAGTGTGactgctcggtcatggaaacccatttcatgaagctcccaatgctGTTCCTTTGCTGAagttacttccagaggcagtttggaactcggtagtgagtgttgcaaccgaggacagatgatttttacacgctacgcgcttcagcactctgtggtcccgttctgtgagcttgtgtagcctaccacttcgcggctgagccgttgttgctcctagattttaccacttaacaataacagcatttac

Function

NR:

description
PREDICTED: protein RCC2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU487339 True 348 lncRNA 0.49 1 67422542 67422889

Neighbor

gene id symbol gene type direction distance location
LOC110524404 LOC106613872 coding upstream 133557 67080011 ~ 67288985 (+)
LOC110524403 LOC106613871 coding upstream 364866 67003157 ~ 67057676 (+)
trnaa-ugc-14 NA coding upstream 382425 67040047 ~ 67040117 (+)
gpc5b LOC106613866 coding upstream 435220 66891208 ~ 66987322 (+)
rpp21 rp21 coding upstream 538514 66840697 ~ 66884634 (+)
LOC110524406 LOC106613873 coding downstream 3438 67426327 ~ 67449696 (+)
LOC110524407 LOC106613876 coding downstream 35651 67458540 ~ 67464323 (+)
fxr1 fxr1 coding downstream 68264 67491153 ~ 67511405 (+)
LOC110524410 NA coding downstream 94523 67517412 ~ 67649527 (+)
sox2 sox2 coding downstream 199382 67622271 ~ 67624355 (+)
G430260 NA non-coding upstream 4048 67417730 ~ 67418494 (+)
G430169 NA non-coding upstream 56642 67364692 ~ 67365900 (+)
G429865 NA non-coding upstream 171202 67199597 ~ 67251340 (+)
G429771 NA non-coding upstream 348667 67073675 ~ 67073875 (+)
G429767 NA non-coding upstream 350463 67071791 ~ 67072079 (+)
G430271 NA non-coding downstream 821 67423710 ~ 67423993 (+)
G430279 NA non-coding downstream 4901 67427790 ~ 67428173 (+)
G430282 NA non-coding downstream 5795 67428684 ~ 67428887 (+)
G430285 NA non-coding downstream 12978 67435867 ~ 67436173 (+)
G430297 NA non-coding downstream 18844 67441733 ~ 67442010 (+)
G429156 NA other upstream 374378 66981949 ~ 67048164 (+)
G428696 NA other upstream 1279937 66142079 ~ 66142605 (+)
G427747 NA other upstream 1901162 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 2393840 65024444 ~ 65028828 (+)
G427476 NA other upstream 2425404 64992101 ~ 64997138 (+)
G430796 LOC106613888 other downstream 680290 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 789827 68212224 ~ 68214236 (+)
G434653 NA other downstream 3536721 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 3795900 71218789 ~ 71223578 (+)

Expression


Co-expression Network