G430271


Basic Information

Item Value
gene id G430271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 67423710 ~ 67423993 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU487342
gtatcaaatacttgttctccccactgtacatgtattgtgtaacatgaagtcctatgagtgtcatctgatgaagttcatcaaaggttagtgattcattctatctctatttctgatttttgtgactcctctctttggctggaaaaatggctgtgtttttctgtgacttggctctgacctaacataatcgtattgggtgcttttgccgtaaagcctatttgaaatcggacacggtggtgggattaacaagaagtgtatctttaaaatggtgtgaaatacttgtatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU487342 True 284 lncRNA 0.38 1 67423710 67423993

Neighbor

gene id symbol gene type direction distance location
LOC110524404 LOC106613872 coding upstream 134725 67080011 ~ 67288985 (+)
LOC110524403 LOC106613871 coding upstream 366034 67003157 ~ 67057676 (+)
trnaa-ugc-14 NA coding upstream 383593 67040047 ~ 67040117 (+)
gpc5b LOC106613866 coding upstream 436388 66891208 ~ 66987322 (+)
rpp21 rp21 coding upstream 539682 66840697 ~ 66884634 (+)
LOC110524406 LOC106613873 coding downstream 2334 67426327 ~ 67449696 (+)
LOC110524407 LOC106613876 coding downstream 34547 67458540 ~ 67464323 (+)
fxr1 fxr1 coding downstream 67160 67491153 ~ 67511405 (+)
LOC110524410 NA coding downstream 93419 67517412 ~ 67649527 (+)
sox2 sox2 coding downstream 198278 67622271 ~ 67624355 (+)
G430268 NA non-coding upstream 821 67422542 ~ 67422889 (+)
G430260 NA non-coding upstream 5216 67417730 ~ 67418494 (+)
G430169 NA non-coding upstream 57810 67364692 ~ 67365900 (+)
G429865 NA non-coding upstream 172370 67199597 ~ 67251340 (+)
G429771 NA non-coding upstream 349835 67073675 ~ 67073875 (+)
G430279 NA non-coding downstream 3797 67427790 ~ 67428173 (+)
G430282 NA non-coding downstream 4691 67428684 ~ 67428887 (+)
G430285 NA non-coding downstream 11874 67435867 ~ 67436173 (+)
G430297 NA non-coding downstream 17740 67441733 ~ 67442010 (+)
G429156 NA other upstream 375546 66981949 ~ 67048164 (+)
G428696 NA other upstream 1281105 66142079 ~ 66142605 (+)
G427747 NA other upstream 1902330 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 2395008 65024444 ~ 65028828 (+)
G427476 NA other upstream 2426572 64992101 ~ 64997138 (+)
G430796 LOC106613888 other downstream 679186 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 788723 68212224 ~ 68214236 (+)
G434653 NA other downstream 3535617 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 3794796 71218789 ~ 71223578 (+)

Expression


Co-expression Network