G430285


Basic Information

Item Value
gene id G430285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 67435867 ~ 67436173 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU487356
cttatggtcaatcttccaatgatttgcctacaaatacgtcacaatgctgctaagaccttgggcgaacgacagaaagtgtaggctcattccttgcgcaatcacagccatataaggagacaatggaaaacagagcttcagaaattctgctaattcctgggtgatgcatcatcttggtttcgcctgtagaatgagttctggggcacttacagacaaaatctttgcagattctgaaacttcagagtgttttctttccaaaactgtcaagaatatgcatagtcgagcatcttttcgtgacaaaatattgcgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU487356 True 307 lncRNA 0.42 1 67435867 67436173

Neighbor

gene id symbol gene type direction distance location
LOC110524404 LOC106613872 coding upstream 146882 67080011 ~ 67288985 (+)
LOC110524403 LOC106613871 coding upstream 378191 67003157 ~ 67057676 (+)
trnaa-ugc-14 NA coding upstream 395750 67040047 ~ 67040117 (+)
gpc5b LOC106613866 coding upstream 448545 66891208 ~ 66987322 (+)
rpp21 rp21 coding upstream 551839 66840697 ~ 66884634 (+)
LOC110524407 LOC106613876 coding downstream 22367 67458540 ~ 67464323 (+)
fxr1 fxr1 coding downstream 54980 67491153 ~ 67511405 (+)
LOC110524410 NA coding downstream 81239 67517412 ~ 67649527 (+)
sox2 sox2 coding downstream 186098 67622271 ~ 67624355 (+)
lrrc40 lrrc40 coding downstream 366656 67802829 ~ 67810322 (+)
G430282 NA non-coding upstream 6980 67428684 ~ 67428887 (+)
G430279 NA non-coding upstream 7694 67427790 ~ 67428173 (+)
G430271 NA non-coding upstream 11874 67423710 ~ 67423993 (+)
G430268 NA non-coding upstream 12978 67422542 ~ 67422889 (+)
G430260 NA non-coding upstream 17373 67417730 ~ 67418494 (+)
G430297 NA non-coding downstream 5560 67441733 ~ 67442010 (+)
G430744 NA non-coding downstream 537387 67973560 ~ 68002686 (+)
LOC110524419 LOC106613886 non-coding downstream 612335 68010191 ~ 68052897 (+)
G429156 NA other upstream 387703 66981949 ~ 67048164 (+)
G428696 NA other upstream 1293262 66142079 ~ 66142605 (+)
G427747 NA other upstream 1914487 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 2407165 65024444 ~ 65028828 (+)
G427476 NA other upstream 2438729 64992101 ~ 64997138 (+)
G430796 LOC106613888 other downstream 667006 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 776543 68212224 ~ 68214236 (+)
G434653 NA other downstream 3523437 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 3782616 71218789 ~ 71223578 (+)

Expression


Co-expression Network