Gene
RNA
| Item | Value |
|---|---|
| gene id | G430798 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 68108101 ~ 68108398 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU487930 | True | 298 | lncRNA | 0.33 | 1 | 68108101 | 68108398 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524419 | LOC106613886 | coding | upstream | 55204 | 68010191 ~ 68052897 (+) |
| LOC110524415 | LOC106613887 | coding | upstream | 107824 | 67996354 ~ 68000277 (+) |
| depdc1a | LOC106613883 | coding | upstream | 112747 | 67987179 ~ 67995354 (+) |
| lrrc40 | lrrc40 | coding | upstream | 297779 | 67802829 ~ 67810322 (+) |
| sox2 | sox2 | coding | upstream | 483746 | 67622271 ~ 67624355 (+) |
| LOC110524422 | gsh0 | coding | downstream | 85354 | 68193752 ~ 68200853 (+) |
| LOC110524423 | LOC106613476 | coding | downstream | 103826 | 68212224 ~ 68214236 (+) |
| elavl4 | LOC106613894 | coding | downstream | 539418 | 68647816 ~ 68716531 (+) |
| LOC110524431 | LOC106613897 | coding | downstream | 802536 | 68910934 ~ 68936736 (+) |
| LOC118964640 | NA | coding | downstream | 1087984 | 69196382 ~ 69222310 (+) |
| G430787 | NA | non-coding | upstream | 18745 | 68089144 ~ 68089356 (+) |
| G430775 | NA | non-coding | upstream | 39484 | 68068264 ~ 68068617 (+) |
| G430749 | LOC106613888 | non-coding | upstream | 49134 | 68058553 ~ 68058967 (+) |
| G430744 | NA | non-coding | upstream | 105415 | 67973560 ~ 68002686 (+) |
| G430803 | NA | non-coding | downstream | 5394 | 68113792 ~ 68114199 (+) |
| G430808 | NA | non-coding | downstream | 10047 | 68118445 ~ 68118863 (+) |
| G430816 | NA | non-coding | downstream | 19666 | 68128064 ~ 68128407 (+) |
| G430826 | NA | non-coding | downstream | 33448 | 68141846 ~ 68142128 (+) |
| G430828 | NA | non-coding | downstream | 35765 | 68144163 ~ 68144619 (+) |
| G430796 | LOC106613888 | other | upstream | 4567 | 68103179 ~ 68103534 (+) |
| LOC110524407 | LOC106613876 | other | upstream | 643778 | 67458540 ~ 67464323 (+) |
| G429156 | NA | other | upstream | 1059937 | 66981949 ~ 67048164 (+) |
| G428696 | NA | other | upstream | 1965496 | 66142079 ~ 66142605 (+) |
| G427747 | NA | other | upstream | 2586721 | 65453856 ~ 65521380 (+) |
| G434653 | NA | other | downstream | 2851212 | 70959610 ~ 70959932 (+) |
| G434792 | LOC106613943 | other | downstream | 3110391 | 71218789 ~ 71223578 (+) |
| G434829 | NA | other | downstream | 3190217 | 71298615 ~ 71298900 (+) |
| ralgps2 | LOC106613957 | other | downstream | 3567473 | 71552653 ~ 71687963 (+) |
