G430808


Basic Information

Item Value
gene id G430808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 68118445 ~ 68118863 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU487940
agcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagagtttaaagccggatttggatccaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagcgcatacaaggagaagactgatcagagatgcagccaagaggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU487940 True 343 lncRNA 0.43 2 68118445 68118863

Neighbor

gene id symbol gene type direction distance location
LOC110524419 LOC106613886 coding upstream 65548 68010191 ~ 68052897 (+)
LOC110524415 LOC106613887 coding upstream 118168 67996354 ~ 68000277 (+)
depdc1a LOC106613883 coding upstream 123091 67987179 ~ 67995354 (+)
lrrc40 lrrc40 coding upstream 308123 67802829 ~ 67810322 (+)
sox2 sox2 coding upstream 494090 67622271 ~ 67624355 (+)
LOC110524422 gsh0 coding downstream 74889 68193752 ~ 68200853 (+)
LOC110524423 LOC106613476 coding downstream 93361 68212224 ~ 68214236 (+)
elavl4 LOC106613894 coding downstream 528953 68647816 ~ 68716531 (+)
LOC110524431 LOC106613897 coding downstream 792071 68910934 ~ 68936736 (+)
LOC118964640 NA coding downstream 1077519 69196382 ~ 69222310 (+)
G430803 NA non-coding upstream 4246 68113792 ~ 68114199 (+)
G430798 NA non-coding upstream 10047 68108101 ~ 68108398 (+)
G430787 NA non-coding upstream 29089 68089144 ~ 68089356 (+)
G430775 NA non-coding upstream 49828 68068264 ~ 68068617 (+)
G430749 LOC106613888 non-coding upstream 59478 68058553 ~ 68058967 (+)
G430816 NA non-coding downstream 9201 68128064 ~ 68128407 (+)
G430826 NA non-coding downstream 22983 68141846 ~ 68142128 (+)
G430828 NA non-coding downstream 25300 68144163 ~ 68144619 (+)
G430837 NA non-coding downstream 38364 68157227 ~ 68157430 (+)
G430860 NA non-coding downstream 66817 68185680 ~ 68190109 (+)
G430796 LOC106613888 other upstream 14911 68103179 ~ 68103534 (+)
LOC110524407 LOC106613876 other upstream 654122 67458540 ~ 67464323 (+)
G429156 NA other upstream 1070281 66981949 ~ 67048164 (+)
G428696 NA other upstream 1975840 66142079 ~ 66142605 (+)
G427747 NA other upstream 2597065 65453856 ~ 65521380 (+)
G434653 NA other downstream 2840747 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 3099926 71218789 ~ 71223578 (+)
G434829 NA other downstream 3179752 71298615 ~ 71298900 (+)
ralgps2 LOC106613957 other downstream 3557008 71552653 ~ 71687963 (+)

Expression


Co-expression Network