G431028


Basic Information

Item Value
gene id G431028
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 68440624 ~ 68520768 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU488203
ccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacattttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttctttttgctactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488203 True 335 lncRNA 0.43 2 68440624 68520768

Neighbor

gene id symbol gene type direction distance location
LOC110524423 LOC106613476 coding upstream 226388 68212224 ~ 68214236 (+)
LOC110524422 gsh0 coding upstream 239771 68193752 ~ 68200853 (+)
LOC110524419 LOC106613886 coding upstream 387727 68010191 ~ 68052897 (+)
LOC110524415 LOC106613887 coding upstream 440347 67996354 ~ 68000277 (+)
depdc1a LOC106613883 coding upstream 445270 67987179 ~ 67995354 (+)
elavl4 LOC106613894 coding downstream 127048 68647816 ~ 68716531 (+)
LOC110524431 LOC106613897 coding downstream 390166 68910934 ~ 68936736 (+)
LOC118964640 NA coding downstream 675614 69196382 ~ 69222310 (+)
LOC110524443 cep350 coding downstream 945503 69466271 ~ 69505008 (+)
LOC110524444 LOC106613912 coding downstream 984727 69505495 ~ 69540163 (+)
G430948 NA non-coding upstream 43668 68324824 ~ 68396956 (+)
G430863 NA non-coding upstream 249898 68190112 ~ 68190726 (+)
G430860 NA non-coding upstream 250515 68185680 ~ 68190109 (+)
G430837 NA non-coding upstream 283194 68157227 ~ 68157430 (+)
G430828 NA non-coding upstream 296005 68144163 ~ 68144619 (+)
G431188 NA non-coding downstream 223995 68744763 ~ 68752767 (+)
G431309 NA non-coding downstream 304883 68825651 ~ 68825945 (+)
G431311 NA non-coding downstream 308199 68828967 ~ 68829171 (+)
G431298 NA non-coding downstream 310016 68830784 ~ 68878076 (+)
G431300 LOC106613896 non-coding downstream 336649 68857417 ~ 68872336 (+)
G430796 LOC106613888 other upstream 337090 68103179 ~ 68103534 (+)
LOC110524407 LOC106613876 other upstream 976301 67458540 ~ 67464323 (+)
G429156 NA other upstream 1392460 66981949 ~ 67048164 (+)
G428696 NA other upstream 2298019 66142079 ~ 66142605 (+)
G434653 NA other downstream 2438842 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 2698021 71218789 ~ 71223578 (+)
G434829 NA other downstream 2777847 71298615 ~ 71298900 (+)
ralgps2 LOC106613957 other downstream 3155103 71552653 ~ 71687963 (+)
G436403 NA other downstream 3982692 72503460 ~ 72504435 (+)

Expression


Co-expression Network