G431446


Basic Information

Item Value
gene id G431446
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 69025267 ~ 69028289 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU488655
atatatttattattctgttttcaattcaaatgttGCACATACCATATTCTGACCATAACTCCCAATACTGACATGTTTACATTTTTAACTAAAATAGGCCTACAATTAGCCCCTTTTTAAAAGCCTATACGTAGACGGCCTAGAAAGAAGTGGTTTATAATTTGAAAATAGAAGTCTATACAAATGATCAATAGTATTTGATAGCCTTTAAATACTAGATGAGGGTATAAAAGAAACCGCTATCTCAGGAGAATCGACAACTCCATTGTATTTACAAACAGAACCATGTATTGAATGAAAAACACTAGAAAGTCATAACTGACCACAAAGCTCATTTACAGAATGCTCTCTACTGATGAACTCAAACAACCTGGATGAAAAGCAGGAGAAGTTGTGCATTGGTTAGAAAACAGTCAGCCCATATCACTCCAGCGCCTTGCCTTTCCCTTGTCAACAGTGTACGTTCACAGTATAGCCCTCTTGATTAGTGACAGTCTCATTTCATCTGAAAACAAATaaccaaacaaaaaaaacatttaatggtATGCTTTGAGATGTTAACATGCCTTAATTTAATTTCACCCCCAATTCGGCCTCTCCTTGCCAACACAACAGGGCTTTgtaagtacccccccccccccccccccccccccccccccccccctgaagtTCAGACAGAAGAACAGCCTTTGTACAAACAGGCAACGGATACTTTCCTCAGTCAGTTAAGACTTTGAAATGCAGTCAAACACTGTGGAATCACTTCagtgaaacacacacaaaaaagatGCGTAGCTTTACAACGCTAACATGAGCAGCGACAGCCGTTTGCTTTACAACGGAACCCCCTACTGACGGCTGTATTCACCTAAAACTAGACGTGTTGAAAATGCAGTGTATATAAAACAAGGGAGAATTTTCCATAGTGGGGCCAGGAGTATTTCTGAGCCAGAGTACAGGAAAAACTCCTTTATCCAGAATACATGACTAAACTATTGCATCTCTAAAGAGATGAGACAAGGTGTCATATGTTGTAGATTATAGTGACATTTGGAATCAGACATTACAGAAGATGGCAAAACCAGCTATTCTAGTAGGAAGTATTTTCACACATGTATCCAAGTTTCTAGCTAACAATTCAATCGTATCTTTCAACttaaaatacatttcaataaTATTCCTGTACAACCGACCTACTTTCCAAAATCTTGACATCTGATATTTAACACAACATTACTTCATGAACCACAAAATAAAATAGTTTTGTCATGTTCTTCGTCTTTTGACTGTATTGGTGCGTAGTGTTGGGAGGGGCAGATTATATATCAAGATCATTAAAAGTGGCCTACATTTGGGGCTACATGCAGAGGTTTGGACATAAGTGGTTTTACTGGTTTAGTTCTTTTTAGCACCTGTACAACCATGTGAGTCTTGTTCACTGCCTGGTGTTTGGCACATAAATATTAATAAAGGGTACTTTGAAGAGAGTTGAGCACAAAGGTTAACAACTAGTAGTAAGTAGTGTCATTAGAACTATATGCACAAATTCAATCACGTTAACTGTAGTCGAAGTAGTCTGACCATCCCAATTGCCTAATGCATGGAGTCATTCACACATTAGTGTTTATCTGAAGACGATGTCCTCTTAGCCATTTCAACCCTCTGGATCATTTGACTTCTGCTACTCTACTCATAAAACGCCAATTCATTTAGTTTGGTAGACCTTGACGTAAGGACATACGTCAGGTCATCTAagaacattgtttttttttacacaagcaagatctcaccccagCCATGAAATCCAATTCACtctgtactgtagatgtctggTGTATAGCCAGATGAATGACAGAGATTGACATTAAGGTCTGAAAAGGCACCCATTGGGCAAGTCAGGAGTATTTTCTGGTTTGCACAAAGATTATGATCAAAATGTAAAGTAGCCTTTTTCACCTACACACGTGAGGAACCAGAAAGACCAGACTACTGGAATTCTTTGCATTGGGGTTGTCATCAATGGGGCAACCACAAAGCAGTCAACTTGCACAACTACTCAGGTCACTTGCCCCAGGCAACGCTTGATCACATATGGATTCCAATTTGACATTGGTTTTCACCCAGATTAATTAGATGAGCATTACTCTTTTCCTATCTTGTTAGAGTTAATCATATAAAGTCAATATCTTTTTTAAAGAGCTCAATACCCTCTGGTCTGGAGCAGGCAAGAGCAATGCAGATGGGGACTGAACTTTTGCAGTTGGTTATTAGCAATATGGTCTGTGTAGTTGAAATGAGGGGACATTACAGctacacatacagtatagacatggAGATTGTATCAGGAGGACTACTGAAGTCTAACAGCCAATCATCTCTATACCTACTACTCAGCCAAACACCAAAAATAACAAACATGAGGATTTGTTATTACATAGACAAACTCTGAAAATGCCAATTGTGAGTGAAACAAAAAGACAGTTGGTGGAATTGTGGGGGTTGGTGGGTGGGTAGGAGCGAGGAGCAAATACTCAAATATCTTAATTGGGACCGAATAGTAGGCCCTTTAGTTCAGTTTTCCCCATCCctcactccttccttccttcctttggTGCGTGCTGGGTCACAAGGGGTGACCAGAGTCTTTCAGGAGAACTCTGACTTGCTCAGGGCAATGGCCAGCTCCAGATCCTCTTGTTCCTGTTGTGCCTGTCTGGCCAAGCGCACCTTCTCCTCCCGCTCACTCTCCCTCGTCGCCCACTCAATCATGTCCTCCTCGGTAGGGTACTGCTGCTTCACaccacatagaaacacacaaaaacacacgcaTAGACACAGCACAGCCCCATCAGAACACCTCAGAGATCCAGAAAATACATACTACTACCCCCCCAAAGACATCCACTGAATTTAACATCCCCCATATTGATCACAAATTTCCCCAAGACACAGCATGTCTGTAATTCTCTGTATTAAAAACAGCCATGTCTC
>TU488656
atatatttattattctgttttcaattcaaatgttGCACATACCATATTCTGACCATAACTCCCAATACTGACATGTTTACATTTTTAACTAAAATAGGCCTACAATTAGCCCCTTTTTAAAAGCCTATACGTAGACGGCCTAGAAAGAAGTGGTTTATAATTTGAAAATAGAAGTCTATACAAATGATCAATAGTATTTGATAGCCTTTAAATACTAGATGAGGGTATAAAAGAAACCGCTATCTCAGGAGAATCGACAACTCCATTGTATTTACAAACAGAACCATGTATTGAATGAAAAACACTAGAAAGTCATAACTGACCACAAAGCTCATTTACAGAATGCTCTCTACTGATGAACTCAAACAACCTGGATGAAAAGCAGGAGAAGTTGTGCATTGGTTAGAAAACAGTCAGCCCATATCACTCCAGCGCCTTGCCTTTCCCTTGTCAACAGTGTACGTTCACAGTATAGCCCTCTTGATTAGTGACAGTCTCATTTCATCTGAAAACAAATaaccaaacaaaaaaaacatttaatggtATGCTTTGAGATGTTAACATGCCTTAATTTAATTTCACCCCCAATTCGGCCTCTCCTTGCCAACACAACAGGGCTTTgtaagtacccccccccccccccccccccccccccccccccccctgaagtTCAGACAGAAGAACAGCCTTTGTACAAACAGGCAACGGATACTTTCCTCAGTCAGTTAAGACTTTGAAATGCAGTCAAACACTGTGGAATCACTTCagtgaaacacacacaaaaaagatGCGTAGCTTTACAACGCTAACATGAGCAGCGACAGCCGTTTGCTTTACAACGGAACCCCCTACTGACGGCTGTATTCACCTAAAACTAGACGTGTTGAAAATGCAGTGTATATAAAACAAGGGAGAATTTTCCATAGTGGGGCCAGGAGTATTTCTGAGCCAGAGTACAGGAAAAACTCCTTTATCCAGAATACATGACTAAACTATTGCATCTCTAAAGAGATGAGACAAGGTGTCATATGTTGTAGATTATAGTGACATTTGGAATCAGACATTACAGAAGATGGCAAAACCAGCTATTCTAGTAGGAAGTATTTTCACACATGTATCCAAGTTTCTAGCTAACAATTCAATCGTATCTTTCAACttaaaatacatttcaataaTATTCCTGTACAACCGACCTACTTTCCAAAATCTTGACATCTGATATTTAACACAACATTACTTCATGAACCACAAAATAAAATAGTTTTGTCATGTTCTTCGTCTTTTGACTGTATTGGTGCGTAGTGTTGGGAGGGGCAGATTATATATCAAGATCATTAAAAGTGGCCTACATTTGGGGCTACATGCAGAGGTTTGGACATAAGTGGTTTTACTGGTTTAGTTCTTTTTAGCACCTGTACAACCATGTGAGTCTTGTTCACTGCCTGGTGTTTGGCACATAAATATTAATAAAGGGTACTTTGAAGAGAGTTGAGCACAAAGGTTAACAACTAGTAGTAAGTAGTGTCATTAGAACTATATGCACAAATTCAATCACGTTAACTGTAGTCGAAGTAGTCTGACCATCCCAATTGCCTAATGCATGGAGTCATTCACACATTAGTGTTTATCTGAAGACGATGTCCTCTTAGCCATTTCAACCCTCTGGATCATTTGACTTCTGCTACTCTACTCATAAAACGCCAATTCATTTAGTTTGGTAGACCTTGACGTAAGGACATACGTCAGGTCATCTAagaacattgtttttttttacacaagcaagatctcaccccagCCATGAAATCCAATTCACtctgtactgtagatgtctggTGTATAGCCAGATGAATGACAGAGATTGACATTAAGGTCTGAAAAGGCACCCATTGGGCAAGTCAGGAGTATTTTCTGGTTTGCACAAAGATTATGATCAAAATGTAAAGTAGCCTTTTTCACCTACACACGTGAGGAACCAGAAAGACCAGACTACTGGAATTCTTTGCATTGGGGTTGTCATCAATGGGGCAACCACAAAGCAGTCAACTTGCACAACTACTCAGGTCACTTGCCCCAGGCAACGCTTGATCACATATGGATTCCAATTTGACATTGGTTTTCACCCAGATTAATTAGATGAGCATTACTCTTTTCCTATCTTGTTAGAGTTAATCATATAAAGTCAATATCTTTTTTAAAGAGCTCAATACCCTCTGGTCTGGAGCAGGCAAGAGCAATGCAGATGGGGACTGAACTTTTGCAGTTGGTTATTAGCAATATGGTCTGTGTAGTTGAAATGAGGGGACATTACAGctacacatacagtatagacatggAGATTGTATCAGGAGGACTACTGAAGTCTAACAGCCAATCATCTCTATACCTACTACTCAGCCAAACACCAAAAATAACAAACATGAGGATTTGTTATTACATAGACAAACTCTGAAAATGCCAATTGTGAGTGAAACAAAAAGACAGTTGGTGGAATTGTGGGGGTTGGTGGGTGGGTAGGAGCGAGGAGCAAATACTCAAATATCTTAATTGGGACCGAATAGTAGGCCCTTTAGTTCAGTTTTCCCCATCCctcactccttccttccttccttccttcctttggTGCGTGCTGGGTCACAAGGGGTGACCAGAGTCTTTCAGGAGAACTCTGACTTGCTCAGGGCAATGGCCAGCTCCAGATCCTCTTGTTCCTGTTGTGCCTGTCTGGCCAAGCGCACCTTCTCCTCCCGCTCACTCTCCCTCGTCGCCCACTCAATCATGTCCTCCTCGGTAGGGTACTGCTGCTTCACaccacatagaaacacacaaaaacacacgcaTAGACACAGCACAGCCCCATCAGAACACCTCAGAGATCCAGAAAATACATACTACTACCCCCCCAAAGACATCCACTGAATTTAACATCCCCCATATTGATCACAAATTTCCCCAAGACACAGCATGTCTGTAATTCTCTGTATTAAAAACAGCCATGTCTC

Function

NR:

description
epidermal growth factor receptor substrate 15-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488655 False 2991 lncRNA 0.41 2 69025267 69028289
TU488656 True 2999 lncRNA 0.41 2 69025267 69028289

Neighbor

gene id symbol gene type direction distance location
LOC110524431 LOC106613897 coding upstream 88531 68910934 ~ 68936736 (+)
elavl4 LOC106613894 coding upstream 308736 68647816 ~ 68716531 (+)
LOC110524423 LOC106613476 coding upstream 811031 68212224 ~ 68214236 (+)
LOC110524422 gsh0 coding upstream 824414 68193752 ~ 68200853 (+)
LOC110524419 LOC106613886 coding upstream 972370 68010191 ~ 68052897 (+)
LOC118964640 NA coding downstream 168093 69196382 ~ 69222310 (+)
LOC110524443 cep350 coding downstream 437982 69466271 ~ 69505008 (+)
LOC110524444 LOC106613912 coding downstream 477206 69505495 ~ 69540163 (+)
LOC110524446 LOC106613913 coding downstream 501240 69529529 ~ 69544049 (+)
LOC110524448 LOC106613915 coding downstream 585842 69614131 ~ 69703302 (+)
G431406 NA non-coding upstream 35431 68984892 ~ 68989836 (+)
G431373 NA non-coding upstream 78629 68944991 ~ 68946638 (+)
G431372 NA non-coding upstream 81195 68943631 ~ 68944072 (+)
G431298 NA non-coding upstream 147191 68830784 ~ 68878076 (+)
G431300 LOC106613896 non-coding upstream 152931 68857417 ~ 68872336 (+)
G431452 NA non-coding downstream 12857 69041146 ~ 69041680 (+)
G431457 NA non-coding downstream 24032 69052321 ~ 69052825 (+)
G431422 NA non-coding downstream 32831 69061120 ~ 69061701 (+)
G431424 NA non-coding downstream 33986 69062275 ~ 69063580 (+)
G431469 osbpl9 non-coding downstream 58684 69086973 ~ 69090173 (+)
G430796 LOC106613888 other upstream 921733 68103179 ~ 68103534 (+)
LOC110524407 LOC106613876 other upstream 1560944 67458540 ~ 67464323 (+)
G429156 NA other upstream 1977103 66981949 ~ 67048164 (+)
G428696 NA other upstream 2882662 66142079 ~ 66142605 (+)
G434653 NA other downstream 1931321 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 2190500 71218789 ~ 71223578 (+)
G434829 NA other downstream 2270326 71298615 ~ 71298900 (+)
ralgps2 LOC106613957 other downstream 2647582 71552653 ~ 71687963 (+)
G436403 NA other downstream 3475171 72503460 ~ 72504435 (+)

Expression


Co-expression Network