G432448


Basic Information

Item Value
gene id G432448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 69147630 ~ 69149826 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU489772
CACAGGTGGTGCCATTACACAATCACAACAGAGAAAGGGTTTGGATTAAAGGCATTCTcaatcctctctctatcttcctccctTACCTGAAGGGCTGTAGGGAGCTGGGTAAATAGGTCTGTTTGTATGCGTCTGCGCTCATGTCTGCGCTCATGTCTGCGCTCATGTCTGCCATCTGTTTTATTAACATGACGATTGAGGGTTTGAATTGTAATCCTCCGGTCTCTGTCTGTTGCATCCtccccacacaacacacacaactctAAAGATCACTAAGAATGACTACATACGTATGTACCAATACCTCAATTAAAAGCAGATCATATTTTGTATGGTTTTTGCCATGTTGTCATTCATGTTTTATTGCATGTTTTCTTGTGTAAAATCCAAAGGCGATTTATGTTCCTGTCAACCCTTATACTCTCACTCATTTCTCTGACTCAGGCTGGTGACTTGCTCACTCTGGCGCTCATCTATTACACATACAGAGCCGCTTCGCATCTCTAGTACAAGGTGTCACCGCAAAGTTATTGGGTCTGGTACCTTTTTAACtccctgttctctgttctctgtaggtCTGGTACCTGTAActccctgtcctctgttctctgttctctgtaggtCTGGTACCTGTTTAACTCCCTGTTCTCTGCAGGTCTGGTACCTGTTTAACTCCCTGTTCTCTGTAGGTCTGGTACCTGTTTAACTCCCTGTTCTCTGTAGGTCTGGTACCTGTTTAACTCCCTGTTCTCTGTAGgtCTGGTACCTGTTTAactccctgtcctctgtcctctgtaggTCTGGTACCTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489772 True 813 lncRNA 0.45 3 69147630 69149826

Neighbor

gene id symbol gene type direction distance location
LOC110524436 LOC106613904 coding downstream 12539 69086959 ~ 69135091 (-)
LOC118964770 NA coding downstream 62365 69085182 ~ 69085265 (-)
LOC110524435 LOC106613903 coding downstream 71421 69066016 ~ 69076209 (-)
LOC110522990 LOC106613902 coding downstream 93414 69050540 ~ 69054216 (-)
eps15 NA coding downstream 97252 69025921 ~ 69050378 (-)
soat1 soat1 coding upstream 38036 69187862 ~ 69198259 (-)
si:dkey-21p1.3 LOC106613908 coding upstream 48661 69198487 ~ 69228669 (-)
LOC110524442 LOC106613910 coding upstream 89705 69239531 ~ 69350551 (-)
LOC110524447 LOC106613914 coding upstream 401977 69551803 ~ 69619075 (-)
LOC110524449 LOC106613916 coding upstream 555045 69704871 ~ 69714330 (-)
G432389 NA non-coding downstream 319980 68826974 ~ 68827650 (-)
G432377 NA non-coding downstream 341310 68806014 ~ 68806320 (-)
G432338 NA non-coding downstream 398647 68748558 ~ 68755057 (-)
G432084 NA non-coding downstream 763868 68345154 ~ 68383762 (-)
LOC110524437 abl2 non-coding upstream 33098 69143474 ~ 69187261 (-)
G433669 NA non-coding upstream 319217 69469043 ~ 69469372 (-)
G433670 cep350 non-coding upstream 319938 69469764 ~ 69470321 (-)
G433680 NA non-coding upstream 334511 69484337 ~ 69484789 (-)
G433682 NA non-coding upstream 336368 69486194 ~ 69486404 (-)
G432513 NA other downstream 141524 69004619 ~ 69006106 (-)
G432310 LOC106613894 other downstream 440182 68699821 ~ 68707448 (-)
bend5 LOC106584333 other downstream 794885 68331871 ~ 68352828 (-)
lrrc7 LOC106613881 other downstream 1329506 67810595 ~ 67983549 (-)
G433683 LOC106613912 other upstream 372988 69486406 ~ 69524790 (-)
G435234 NA other upstream 1841066 70990892 ~ 70991798 (-)
G435176 NA other upstream 1918199 71068025 ~ 71068887 (-)
LOC110524478 LOC106613944 other upstream 2079356 71226012 ~ 71242283 (-)
il23r LOC106613945 other upstream 2136564 71285725 ~ 71308015 (-)

Expression


Co-expression Network