G433683 (LOC106613912)


Basic Information

Item Value
gene id G433683
gene name LOC106613912
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 69486406 ~ 69524790 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU491078
TGAGACCAGTAAGCCTAATGTAACGGACACCAGCTAAAACCCCAATCCTGCTTATTTTGTACCCTGTGAACAAGTGCTGCTCTACAACACTTCTTTAATGTCTAAACTCTATTGTGCAAAGCTAATTGGGACATATAAGATGCACTAGCCAATCAGACAATAGCATGGTATGGCCAGTCACAACATAGACCACTTTGGAACAGAATGTGTGAACCATAGAAttacattttttacaattttacctttatttaactaggcaagtcagttaagaacaaattcatattttcaatgacggcctaggaacagtgggttaactgcctgttcaggggcagaacgacagatttgtaccttgtcagctcggggatttgaacttgcaaccttccggttagtagtccaacgctctaaccactagaataagAACTAATTCTATAGTGTGAACAATATACAACATTaatctgaccacacacacacacacacacacacacacacacacacacacacagttcagttcGTGAATCACACTACACGGTCTACACACGTCTAATAAAATAGCTCTCATCTCACAACAAATGCAGTGAAGTTAGATTGCGTTCTATAAATATTAAAGGTGTTTTGCAAATATGAAGCCCTCCTTGAGAGTATCAACAATCTACCAAGTTGGGGCATGGTTCTAACTCTAGGTGATTCCTTTCTGTATTCTGCAGAGTTGCTCGTTCTAAATGCCagtggtgtgtgtacagtaccctGGCTGCTTTCTGCCGTGTCTCCTCCAGCTGACGTTGGGTCTCCAGTGCCTCCTGCTCTGCCTTTACCTTCAGCTCATAAAGGTCACGCTCGTGCCGCTGCTGCTGCGCCTGAAAGgttagaggtcaaaggtcaggacCTATGGCAAAAAGGCGAATGAAAACTACCAGAACATAACGAACACGCCAAAAGTGCTGAAGGTAATGTTTCAAAAGTGCAGCAGCACTATACTAAGCATCTAAACATATTGTTAGCAATCTTCAGGTGTTCTGATTGGTGGGTTAGCATCTATC
>TU491077
TGAGACCAGTAAGCCTAATGTAACGGACACCAGCTAAAACCCCAATCCTGCTTATTTTGTACCCTGTGAACAAGTGCTGCTCTACAACACTTCTTTAATGTCTAAACTCTATTGTGCAAAGCTAATTGGGACATATAAGATGCACTAGCCAATCAGACAATAGCATGGTATGGCCAGTCACAACATAGACCACTTTGGAACAGAATGTGTGAACCATAGAAttacattttttacaattttacctttatttaactaggcaagtcagttaagaacaaattcatattttcaatgacggcctaggaacagtgggttaactgcctgttcaggggcagaacgacagatttgtaccttgtcagctcggggatttgaacttgcaaccttccggttagtagtccaacgctctaaccactagaataagAACTAATTCTATAGTGTGAACAATATACAACATTaatctgaccacacacacacacacacacacacacaatctttgtGTATTTGGAAACATCCACTTGCTTTATGCTAAAATCAATATGGATAATCTACTTTCAGGCACCGTTTTTCCAAAATGACATTCAAGGCACATTTCTCTTTGTAAAATCACATTTTCTAATGGAGGTTGATTTCTTTCTAAGAATATAAAATCATTGTTAGAGTACACAGCTCATAGAACTCTTTGGAAAGGCTGGCAGTGACAGGTCTAAGAGAAAAGAGCAGTGCTTCTCATATTACATTAGGGCTTTTATCCATAAAACTATATAAAGTGATTCTTTTTTCACATAAATTAATTTGTCATTATATACAGACTAAGAATTACAATAAATATCAAATAAACCCCTTTAGTtgttttcacaaaaaaaaaaaaaatcccattaaTTCCCTGGTGTTTTAATTCATCCTTCAGAAGTGGTCAAAAAAGGCTAAATACTTTGGCTAAATTATTATCCTGAATGCAAGCACCATGAAGCAATCCATTGATGCAGAACATTACGAATCCTTCAGTTGGAGGGATTCGGAACTGACCACAGCGTCACAGTATGGGTAAATCTACAGTAGCATTGCCAGGTAATGTTGACTCAGGGCAGAGCCACCTTGGCCCGTCGCAGCCGCCAGCGGTTCTTGAAGAAGAGGTACATGGCCAGCAGACACATTGAGGACAGGAAGTAGAGGAGCACACACAGGCTGATGTCCAGTCTGGAGAAGCCCACGCTCAGCAAGGACATCCAGCGCCTCTTGTTAGGGTGCGGGTACATCTCCAGAGCCCCCTCCTCCTCTGACCCAGTGTACTTGCCCGTCAGAATCCTCTTCTGCAGCGTTTTGTGCTGCCCCAACAAGTCCTCTGGCCCCTGTTCCAGGCCGGCTCCAGGCTGCGGCTGCTCCTTCATCTGCAGGGTCCTGAGTTTGACATGGAAGGACACTCTGGCAGCAGCGAGGAGGGCCTTGTAGTACTGGTTGATGGAGTCCAGGTCTACAATCTCCTCCTGGGGGGGCCTGAACTTCAACCCCACGATGCTGGGCCTGCGCTGGGGCTGGTGGGACACATCTGCCTTGGGCTTTACCCAAGGTGGGGGTTCAGATATTTGCACCTTTTCTCCTGCCCTCGCCGCCTCCTCTTCTGCTGGCTGTTCTTTAGCCACTTCCTCCTCCGGCTGTGGTTTGAGCAAGGTGTCCTGGGTCTGTCTGgccctcccctctgctcctctcttggcctcctgctctttctcctgatGCCTGGCAACCAGCCTCTCCTTCTGCCTGCTGAGGAGCTGGGCCTCCTCCTccaggtagtcagagaggaggTGTTCAGAAGAGAAGTGGGAGCGGAGGAAGGTGAGCAGCTCTGCCTGGTTCCAGGTGTGTTCTCCATTCTTAACCCCGTGGCAACTGGGACACAGCTCTGGGGACGGCCACTGGATCTTAGGGAAGTGAGGATCCTCACTCAGA

Function

NR:

description
sulfhydryl oxidase 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU491078 False 1037 lncRNA 0.43 2 69486406 69524790
TU491077 True 1944 TUCP 0.47 2 69522814 69524790

Neighbor

gene id symbol gene type direction distance location
LOC110524442 LOC106613910 coding downstream 135855 69239531 ~ 69350551 (-)
si:dkey-21p1.3 LOC106613908 coding downstream 257737 69198487 ~ 69228669 (-)
soat1 soat1 coding downstream 288147 69187862 ~ 69198259 (-)
LOC110524437 abl2 coding downstream 299145 69143474 ~ 69187261 (-)
LOC110524436 LOC106613904 coding downstream 351315 69086959 ~ 69135091 (-)
LOC110524447 LOC106613914 coding upstream 27013 69551803 ~ 69619075 (-)
LOC110524449 LOC106613916 coding upstream 180081 69704871 ~ 69714330 (-)
LOC110524450 k0841 coding upstream 190492 69715282 ~ 69728426 (-)
LOC110524451 LOC106613917 coding upstream 213573 69738363 ~ 69743354 (-)
LOC110524454 rfc4 coding upstream 219796 69744586 ~ 69751448 (-)
G433682 NA non-coding downstream 2 69486194 ~ 69486404 (-)
G433680 NA non-coding downstream 1617 69484337 ~ 69484789 (-)
G433670 cep350 non-coding downstream 16085 69469764 ~ 69470321 (-)
G433669 NA non-coding downstream 17034 69469043 ~ 69469372 (-)
G433725 NA non-coding upstream 30229 69555019 ~ 69556491 (-)
G433735 NA non-coding upstream 131219 69656009 ~ 69703291 (-)
G433814 NA non-coding upstream 204765 69729555 ~ 69729792 (-)
G433818 NA non-coding upstream 208165 69732955 ~ 69733165 (-)
G433820 NA non-coding upstream 212154 69736944 ~ 69737409 (-)
G432513 NA other downstream 480300 69004619 ~ 69006106 (-)
G432338 NA other downstream 731349 68748558 ~ 68755057 (-)
G432310 LOC106613894 other downstream 778958 68699821 ~ 68707448 (-)
bend5 LOC106584333 other downstream 1133661 68331871 ~ 68352828 (-)
lrrc7 LOC106613881 other downstream 1668282 67810595 ~ 67983549 (-)
G435234 NA other upstream 1466102 70990892 ~ 70991798 (-)
G435176 NA other upstream 1543235 71068025 ~ 71068887 (-)
LOC110524478 LOC106613944 other upstream 1704392 71226012 ~ 71242283 (-)
il23r LOC106613945 other upstream 1761600 71285725 ~ 71308015 (-)
G436172 LOC100136696 other upstream 2516172 72040962 ~ 72121697 (-)
G433697 NA non-coding downstream 17888 69502514 ~ 69504926 (-)
G433688 NA non-coding downstream 33056 69489450 ~ 69489758 (-)

Expression


Co-expression Network