G433697


Basic Information

Item Value
gene id G433697
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 69502514 ~ 69504926 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU491098
CCGCAAAGTGAACAATGTTTATTTTACAATAATCATATAGATTCAATAGTGATTGATTCAATATACAAGAACACCCCATAAAACAATGTACAAGTCTTCAAGTGCACCTGCGTCTCTCACAGTAGTACATtattataaatattcatacacttTAAAGATGCAAAAACATTTTGCTAGTCTGCAGGCCATTTGATTATCTAACCATTTTTGACtaatatacatttttgttttggaATTGAAATCCCTGTCCTCAAAGCAAGGCAACCCTGAAGAAGACACTGCATGCCCAAACGTTGGTTGTTATTCCCATTAAATGTTTGGGAGCATAATTAATGTGAGACTTTTTATTTTGATAATTTACTCTCCATTAGTCAGCATCTCTATAAAACGTTGTTTGGTGAGCCTCAGCTTGTGCCTTTCACAGTAAGGCCCAACACAATCCGAGACAGACAGCAGTTTGAAAACAATGAGGCATTTTGACTGTCCTATGGGAGGCCCAGAGAACTTCAACTATATTGTTATTCAATGAGACTACAAAGCTGGCTTGTAAAACAATGTATCCAAACAACAAATACTGCATAGATATAAATGGGACATTTCATCCCCAAACTACAATCAATTCAGATTTTTTTAACCATTCTAGACCACCAGGAATTAACATTAAAGTCAGACAAGTCAGGACTATTTTTCAGTTACCTGAAGATTATCACTTCCCAGAAAATGTAAATGAGCTAGttagttttattagtcgtatttACACTCAGAAGTGTCATATTGCCTGCCTTTCACCTACACATATGGGAAGAATCAGAAACATCAGTACTGGAATTCTTAGTATAATGGTTGTCAGTACAAAAAAAAATCTCACCAGGCTCAACTTGCCCCACAAATGTTCTGTCTTTCACTTAACTGGGAGGAACCAGAAATATCAATTGTAGGCTTATGAAATTCTTTGCAGttgggatttttttatttaactaggcaagtcagttaagaacaaattcttatttacaatgacggcctaggaacagtgggttaacggccttgttcaggggcagctcggggattcgatccaccaacctttcggttactggcccaacgctctaaccacttggctacctgccaccccaaaataGGGCATCCCTAAATGTCAATCCCTGGGGAAGTGTTGCAATACACAGCCTTGTGGAAATGCATTTCCTAGGTACAAATCAAATCATAGTTCTCTCATTAAACACATCTAGGGACCGGAAATTAGGCATATCATGGAGAAACAGGTTTCAAAGGAAAATGTACAGCCCTAGCAATagacagtttaaatatctacccctTCATCCGGTACAAGAACAGTGGTGGTAAATGCTAATTGGTATGCAAACTTTCATTACCACCATTAAAGTCACTTTGCTAACAGGCATTACAGTTGACAAGCACAGTCATGCATGTTAAATTCATCTGTAGCTACATCACAGTATTCTTGGACTGAAGTAGCTAAAGAAGAGTAAGCCCTTGAACATCAATGTTGAATGCTACGACCCACACAGATTAATCCATGACTCACTTGTTACCATGATGCAAAAGCCATTGTGTACGTGGACGAATGGCGAGAACACTTGGTTGCCTTACAGTATATCAAATGTGCATCATCAGTGACATCCACAGAGGCATAACGACACAGAAGCTAGTTTATCTACCTACCATAAATGGCATTTGAGAAGGTGTTCTCTGATAGAACTATGCTTCGATAGACACAGAATAAGGCAGAGACTGAAGGTTTACCCAGTTGGGGAAAAGTTATCCTTTAGGTATTTATGAAAAACATGGTATATATGTAAATAACATTAAAAAGAGTAGATACATCACTTAAGGCCTATAAATTGTGTTGCTCTTCTTGAGTGAGGCAATTCATAATCATACAGAACAGAGGCACTTTAACTGAAACAGGTAAAAAACTCATCTTAAGGCTTGAATCCAGCATGACAGAATTAAAGGTTTCTAACCATGTAGAACCTCTTGGTGTCTGTTTGTGGCCAAGAGGCTAGTTAACAGGTAAAACTATGGAAGAAAAGGGACAGTGGTCAAATTCACCAATTACTAATAAGATATTTAAATATTAAATACAAATAGATATCTTTGCAGGTCTTTTCAACAACATTCCCTTTAAATCCCTATACAGTGAATTGCCATTTTCACATTCCCATTTATTTTTGTGCTTTGTTATTTCATCAGTCTGTTTTACAAAATGCTCAAATAAACTTTGTTTCTAAACATGTTAACAGCAAGATtact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU491098 True 2289 lncRNA 0.37 3 69502514 69504926

Neighbor

gene id symbol gene type direction distance location
LOC110524442 LOC106613910 coding downstream 151963 69239531 ~ 69350551 (-)
si:dkey-21p1.3 LOC106613908 coding downstream 273845 69198487 ~ 69228669 (-)
soat1 soat1 coding downstream 304255 69187862 ~ 69198259 (-)
LOC110524437 abl2 coding downstream 315253 69143474 ~ 69187261 (-)
LOC110524436 LOC106613904 coding downstream 367423 69086959 ~ 69135091 (-)
LOC110524447 LOC106613914 coding upstream 46877 69551803 ~ 69619075 (-)
LOC110524449 LOC106613916 coding upstream 199945 69704871 ~ 69714330 (-)
LOC110524450 k0841 coding upstream 210356 69715282 ~ 69728426 (-)
LOC110524451 LOC106613917 coding upstream 233437 69738363 ~ 69743354 (-)
LOC110524454 rfc4 coding upstream 239660 69744586 ~ 69751448 (-)
G433688 NA non-coding downstream 12756 69489450 ~ 69489758 (-)
G433682 NA non-coding downstream 16110 69486194 ~ 69486404 (-)
G433680 NA non-coding downstream 17725 69484337 ~ 69484789 (-)
G433670 cep350 non-coding downstream 32193 69469764 ~ 69470321 (-)
G433669 NA non-coding downstream 33142 69469043 ~ 69469372 (-)
G433725 NA non-coding upstream 50093 69555019 ~ 69556491 (-)
G433735 NA non-coding upstream 151083 69656009 ~ 69703291 (-)
G433814 NA non-coding upstream 224629 69729555 ~ 69729792 (-)
G433818 NA non-coding upstream 228029 69732955 ~ 69733165 (-)
G433820 NA non-coding upstream 232018 69736944 ~ 69737409 (-)
G432513 NA other downstream 496408 69004619 ~ 69006106 (-)
G432338 NA other downstream 747457 68748558 ~ 68755057 (-)
G432310 LOC106613894 other downstream 795066 68699821 ~ 68707448 (-)
bend5 LOC106584333 other downstream 1149769 68331871 ~ 68352828 (-)
lrrc7 LOC106613881 other downstream 1684390 67810595 ~ 67983549 (-)
G433683 LOC106613912 other upstream 17888 69486406 ~ 69524790 (-)
G435234 NA other upstream 1485966 70990892 ~ 70991798 (-)
G435176 NA other upstream 1563099 71068025 ~ 71068887 (-)
LOC110524478 LOC106613944 other upstream 1724256 71226012 ~ 71242283 (-)
il23r LOC106613945 other upstream 1781464 71285725 ~ 71308015 (-)

Expression


Co-expression Network