G433735


Basic Information

Item Value
gene id G433735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 69656009 ~ 69703291 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU491147
AAAAAGCCAGAGCCAGGGcgacagtttaaaaaaatatgcgTGGTTTATAAAACCCAGATGTGACAGGATCACCAAAGTGTATACAGAAATACAAATGAGACCATCGTTAAAACCATCATAGTACAGCGTTATACACTCAACATTTACAATCTACTCTGTAAAAGGGCTATTGTAAGACATTTCCTTTCTTGTCTTTTTAAAACACAACCACATAACTGATCTTTTTATCAGTTTTCATAACGTGTTTAAAGTACATCCATGTAGTTACTATAGACACCATTAGTCTTCTACTTTAGAAAGGGTACAACAACATCAAGTAGGAAGTAAATATGCAGAGACATCAAGCACATAACATGGGATTTAGCAAGCAGTAAAATCAGCAAATCATTGAGAGGTATTACTCATGAGAAAATGTGATGTCAGGGCTTGCGTATGATTCAGGTCTTAGAAAAAACCTATACAAAGTAACCCTCAATGTCAAAGGGTTATCACTTTCTGACCATATCTTGACATTAAAAAATGGCTCAGTTGTACATAAATTAGTGAATAACTGCTAAGCAGTCATATGCATTAGAATGCTTTCATCTTAGGAAACCATTAGTATCTTGTTAGTGTCATCACTCGCTTGACTGAGGGTTGTCAACCCCTAGTCCCCTCCCTCCAGTAGCCCTGGACGCAAACCCTGAGGATGAGGGAGCCAGGAAAAAATATGGAAACACCAACAAGATACAGCCAATCACAATCCAGGTTCACTTTCtactttttctcttttttttttttaacaaacacaattcaacaggTTTTACACTTAAAGAATGCAGGATTGTGAACAATCAAAATGCTCCTCAACACCTGGAATACTGCTTGTGCTAAAGCTAAATGAAAAACAATGTATGTAATCAAGGAAGAACAGTACAGCTAGAATAATCAGTATTCTCCAGATAATTAAAACAATCATTCAGATATGTACAATGGAAAACAAAAGCAGCATGCAGGCAAGACAATTGTCAGAGTGATACTTAAACAATCTCATGAAGGTGGGAGGGAGAAGTTTGTGGTCTCTGACAAAAGAGGACAGTGTTAACAGTGTTTTAGACTAGATTaaacagagagtgtgtgtatctgtgtgtgtgtttcggggGGTAGAAGAGCTCTCCATCACTTCAAAAGGACTGAAATGCCAAAGGTGACCTTGCAGCAGGGTGCTCTTTGGTGGAAAGACTGGTTGACTAGCCTGTTCCATATTTGTAGTGAGTGTGGAAAGAAAGTGGAAGCAACTGTTCTTCCAACAAAGAGGACACAATCAGTAGTTAGATCATTGAATTGTGTGTTTTGTGATAGTGGTTTCTATCACTAGCAGACTTCATTGCACAGCCATAATTGCCAAATGTCTAAGTGCATCATCACCACAGTCATGGAAGAAATCTATCTCAAAGGCACACGACATTGTGTGTATTTCTTGTTGTTGATGGTGCTATTACACATTTACAACATTTTGTAGCCTATGAACTTTGCAATTGAAACAAATATTTGGTGCTGGGACCCCAACTGTCATTTCTCATTAGACGCGTCAACAGTCTAAATAATAAAGAAAGGCTAAGAGAAAGGCAAGACAAGCTCATGCTGATTGATCGACACATCAACACTGTACATCAACTACTGCATTGTGTAAACACAGTTGAGCCCcggggtgacagagagaggctgTCACACACAGTGAGTGGGGAGAAAGcagtcaacaacacacacttATCCTTCCCTTGAAAAGCCACGAGGTCCACGATAAGGGGCTTTACCCGCTTCAAAGTTACAGCCGATAGATTCAGCTTGAAAATGATATAAGTAAAGCATGCATGTAACAAAATGAACAAACAAAAAGAGTGCTAACAATGGATGCCAGTTGAACCATTTCCATGGGGTTCTTTTTCTTGGCGAAACCAAGTAATAAAAAGTACCAATGTTAATCAAGGAACAACATATGTTAAAACAAAATCATGAGTTTTGTTGATGAGTGCATTGCCATAAAAGCATGAGAAACAGACATGTACTGTAGAATGAGTTGATAAATGATAAATCAACTTCACCTTCAACATCATTTTTGGGCACTGAGACTTGAAACTGTGAGCTAACCCAGTCCTAAACAACAGAGTAAATACTGCAGGCCCTACAACCCAAGGAGGACGGGCCTATTTAATCACGGCTATCTGATCTGAGAACTACTGTTCCACAGCATAGTCTTTCCAGGATTAAAGATCACTTGACACAGCAGGTATACGACTCGCTCACTTGGTCCCAGGCCTGACAAACCCTACCACCAAAAACCCTGGCACACGCAGAGTCCCAGGGCCTATGATACTGTACATGACGCATGCATTCTATATTCAAAAGAGGTGATGCAGTAGCTTTGTTGTAAAGTTCGTAGATATTTCAGAGGAAGAATGGCAGATCAGGGTGTGGACTGTTATTTGGATAGTGAAAGTGCTAGCAGACATGACAGATGAGGATCTCCTGTTTAGCCAGGGCATCCCTCCCATGGAAAACTCATCTCAACAGACGAAATCAATATCCTGTGAAGATGCCACATGATCTACTTGGCGGTATTACAGTCAGAGGAACCCCAGTGGAAAACCCTGATCACTGTCAGCTGATCTCGCTCCACTGCTTCTGAGAAAGTAGAACAACAGAGAAAATACAAAGTGCCCCACACAATCAGTAGAAAACACTGCAATCGAAAATGGTCACAGTGTTGTTTTAGTTGTTGAGCAATAAAAAGAGAGAATGGGATAGTATTCTTAAAAGGGTAGAGAAATGCACGAGACTCTCAGACATCTCAGTAGAACAAACAGACTATTCTTCTCAGGCTAGCTAGATGATTGATGCTACGCCAGTGAACAACATTCATTAAAATAACGCTTTAGCAGAAAAGCAAAGTACAGTTATGAACATGTAGGGCACTTGAACTAAGCCAATTAGATAATTGACTTGTTTGTTTTTGCAAAACTTTGAAGTTGTAACATGGGCTGGCTAACTGATCTGTGGGAAAAGTTTATATGAGAGGGAGAATGAGCCACCTGAAGTGTTCTTAGTCTTCTACGGAAACAGTAGCTTTTTAGAAAACATGGCACAAGTCTAATTCAACATTCCCACCATTGAGAAACACATACATATCATTGCACAGATGCTTGAGCTATTCTCATTCTTCTAAATAATACATGGAGTACATAATAGTGCACATGAACAAATATACAAAGCAACTTTCACAGACTAAAATATgtttaaattatatttttgtacaagttgtttttgtttgtttgtattaaATGCACTTTTCCTGCAAGTGCCGCCAGGGTTTTACACTGACTTTATTATTACAACTCAGTAAACAAAATCAACCCAGTAAGTGGAGTAGAAAAGGAAGCAACAGGTTGAAACCAGTTGATGTTGTTGATATGCTGTGGTAAATGTTGCGATCCAGAGTCCATGCTCAGgcttgttattattattagtctTTTTGATAAATATTTCTTCTCCCTGTTCATCCTAATATAATAAATGCATGTAAACAGTCGTTTGTTCTCTAATACATCTCCAAAAATGGCAAAGAACTACAAAAACAAATATACAAACAAAAAAGTATCAACATAAAGTCTGTTAAATTAAAGTACTCATAGGAAAATCCCAGTGCTTGGTGGGTTTTCCAAATATGTTCCTGTGTGTATCCCTCTTTGTCTGAAGAActcaaaactgtgtgtgtgtgtgtgtgtgtgtgtgtaatcccaTCTCATCTATACCAATATCATATACTGAGATTGTGCTTGAATAAATTAATCTGTTTGTGTGTCACTGAATTATTGTGTGTTTCTTTGTATGTCTATATGTAttagtgtgtatgtttgtgtctgCCTGCGTGTCTACCTGTGTCTGCCTGCGTGTCTACCTGTGTCTGCCTGCGTGTCTacctgtgtctgcctgtgtgtctacctgtgtctgCCTGCGTGTCTACCTGTGTCTGCCTGCGTGTCTACCTGTGTCtgcctgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctcagtcaccagatctcaacccaattgaacacttatgggagattctgga
>TU491146
AAAAAGCCAGAGCCAGGGcgacagtttaaaaaaatatgcgTGGTTTATAAAACCCAGATGTGACAGGATCACCAAAGTGTATACAGAAATACAAATGAGACCATCGTTAAAACCATCATAGTACAGCGTTATACACTCAACATTTACAATCTACTCTGTAAAAGGGCTATTGTAAGACATTTCCTTTCTTGTCTTTTTAAAACACAACCACATAACTGATCTTTTTATCAGTTTTCATAACGTGTTTAAAGTACATCCATGTAGTTACTATAGACACCATTAGTCTTCTACTTTAGAAAGGGTACAACAACATCAAGTAGGAAGTAAATATGCAGAGACATCAAGCACATAACATGGGATTTAGCAAGCAGTAAAATCAGCAAATCATTGAGAGGTATTACTCATGAGAAAATGTGATGTCAGGGCTTGCGTATGATTCAGGTCTTAGAAAAAACCTATACAAAGTAACCCTCAATGTCAAAGGGTTATCACTTTCTGACCATATCTTGACATTAAAAAATGGCTCAGTTGTACATAAATTAGTGAATAACTGCTAAGCAGTCATATGCATTAGAATGCTTTCATCTTAGGAAACCATTAGTATCTTGTTAGTGTCATCACTCGCTTGACTGAGGGTTGTCAACCCCTAGTCCCCTCCCTCCAGTAGCCCTGGACGCAAACCCTGAGGATGAGGGAGCCAGGAAAAAATATGGAAACACCAACAAGATACAGCCAATCACAATCCAGGTTCACTTTCtactttttctcttttttttttttaacaaacacaattcaacaggTTTTACACTTAAAGAATGCAGGATTGTGAACAATCAAAATGCTCCTCAACACCTGGAATACTGCTTGTGCTAAAGCTAAATGAAAAACAATGTATGTAATCAAGGAAGAACAGTACAGCTAGAATAATCAGTATTCTCCAGATAATTAAAACAATCATTCAGATATGTACAATGGAAAACAAAAGCAGCATGCAGGCAAGACAATTGTCAGAGTGATACTTAAACAATCTCATGAAGGTGGGAGGGAGAAGTTTGTGGTCTCTGACAAAAGAGGACAGTGTTAACAGTGTTTTAGACTAGATTaaacagagagtgtgtgtatctgtgtgtgtgtttcggggGGTAGAAGAGCTCTCCATCACTTCAAAAGGACTGAAATGCCAAAGGTGACCTTGCAGCAGGGTGCTCTTTGGTGGAAAGACTGGTTGACTAGCCTGTTCCATATTTGTAGTGAGTGTGGAAAGAAAGTGGAAGCAACTGTTCTTCCAACAAAGAGGACACAATCAGTAGTTAGATCATTGAATTGTGTGTTTTGTGATAGTGGTTTCTATCACTAGCAGACTTCATTGCACAGCCATAATTGCCAAATGTCTAAGTGCATCATCACCACAGTCATGGAAGAAATCTATCTCAAAGGCACACGACATTGTGTGTATTTCTTGTTGTTGATGGTGCTATTACACATTTACAACATTTTGTAGCCTATGAACTTTGCAATTGAAACAAATATTTGGTGCTGGGACCCCAACTGTCATTTCTCATTAGACGCGTCAACAGTCTAAATAATAAAGAAAGGCTAAGAGAAAGGCAAGACAAGCTCATGCTGATTGATCGACACATCAACACTGTACATCAACTACTGCATTGTGTAAACACAGTTGAGCCCcggggtgacagagagaggctgTCACACACAGTGAGTGGGGAGAAAGcagtcaacaacacacacttATCCTTCCCTTGAAAAGCCACGAGGTCCACGATAAGGGGCTTTACCCGCTTCAAAGTTACAGCCGATAGATTCAGCTTGAAAATGATATAAGTAAAGCATGCATGTAACAAAATGAACAAACAAAAAGAGTGCTAACAATGGATGCCAGTTGAACCATTTCCATGGGGTTCTTTTTCTTGGCGAAACCAAGTAATAAAAAGTACCAATGTTAATCAAGGAACAACATATGTTAAAACAAAATCATGAGTTTTGTTGATGAGTGCATTGCCATAAAAGCATGAGAAACAGACATGTACTGTAGAATGAGTTGATAAATGATAAATCAACTTCACCTTCAACATCATTTTTGGGCACTGAGACTTGAAACTGTGAGCTAACCCAGTCCTAAACAACAGAGTAAATACTGCAGGCCCTACAACCCAAGGAGGACGGGCCTATTTAATCACGGCTATCTGATCTGAGAACTACTGTTCCACAGCATAGTCTTTCCAGGATTAAAGATCACTTGACACAGCAGGTATACGACTCGCTCACTTGGTCCCAGGCCTGACAAACCCTACCACCAAAAACCCTGGCACACGCAGAGTCCCAGGGCCTATGATACTGTACATGACGCATGCATTCTATATTCAAAAGAGGTGATGCAGTAGCTTTGTTGTAAAGTTCGTAGATATTTCAGAGGAAGAATGGCAGATCAGGGTGTGGACTGTTATTTGGATAGTGAAAGTGCTAGCAGACATGACAGATGAGGATCTCCTGTTTAGCCAGGGCATCCCTCCCATGGAAAACTCATCTCAACAGACGAAATCAATATCCTGTGAAGATGCCACATGATCTACTTGGCGGTATTACAGTCAGAGGAACCCCAGTGGAAAACCCTGATCACTGTCAGCTGATCTCGCTCCACTGCTTCTGAGAAAGTAGAACAACAGAGAAAATACAAAGTGCCCCACACAATCAGTAGAAAACACTGCAATCGAAAATGGTCACAGTGTTGTTTTAGTTGTTGAGCAATAAAAAGAGAGAATGGGATAGTATTCTTAAAAGGGTAGAGAAATGCACGAGACTCTCAGACATCTCAGTAGAACAAACAGACTATTCTTCTCAGGCTAGCTAGATGATTGATGCTACGCCAGTGAACAACATTCATTAAAATAACGCTTTAGCAGAAAAGCAAAGTACAGTTATGAACATGTAGGGCACTTGAACTAAGCCAATTAGATAATTGACTTGTTTGTTTTTGCAAAACTTTGAAGTTGTAACATGGGCTGGCTAACTGATCTGTGGGAAAAGTTTATATGAGAGGGAGAATGAGCCACCTGAAGTGTTCTTAGTCTTCTACGGAAACAGTAGCTTTTTAGAAAACATGGCACAAGTCTAATTCAACATTCCCACCATTGAGAAACACATACATATCATTGCACAGATGCTTGAGCTATTCTCATTCTTCTAAATAATACATGGAGTACATAATAGTGCACATGAACAAATATACAAAGCAACTTTCACAGACTAAAATATgtttaaattatatttttgtacaagttgtttttgtttgtttgtattaaATGCACTTTTCCTGCAAGTGCCGCCAGGGTTTTACACTGACTTTATTATTACAACTCAGTAAACAAAATCAACCCAGTAAGTGGAGTAGAAAAGGAAGCAACAGGTTGAAACCAGTTGATGTTGTTGATATGCTGTGGTAAATGTTGCGATCCAGAGTCCATGCTCAGgcttgttattattattagtctTTTTGATAAATATTTCTTCTCCCTGTTCATCCTAATATAATAAATGCATGTAAACAGTCGTTTGTTCTCTAATACATCTCCAAAAATGGCAAAGAACTACAAAAACAAATATACAAACAAAAAAGTATCAACATAAAGTCTGTTAAATTAAAGTACTCATAGGAAAATCCCAGTGCTTGGTGGGTTTTCCAAATATGTTCCTGTGTGTATCCCTCTTTGTCTGAAGAActcaaaactgtgtgtgtgtgtgtgtgtgtgtgtgtaatcccaTCTCATCTATACCAATATCATATACTGAGATTGTGCTTGAATAAATTAATCTGTTTGTGTGTCACTGAATTATTGTGTGTTTCTTTGTATGTCTATATGTAttagtgtgtatgtttgtgtctgCCTGCGTGTCTACCTGTGTCTGCCTGCGTGTCTACCTGTGTCTGCCTGCGTGTCTacctgtgtctgcctgtgtgtctacctgtgtctgCCTGCGTGTCTACCTGTGTCTGCCTGCGTGTCTACCTGTGTCtgcctgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtatatgtgtgtgtgtgtggtgtgtgtgtggtgtgtgtgtgaggcagctCTGTGATGGAGTGATCACTGGGGTTGTAGAGCTGGTGCTTTGGGCTCAGCTGAAGGCCTCATCATCCGTGTCCTCAATCAACACCTTGGTGTCCTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU491147 False 4153 lncRNA 0.39 2 69656009 69703291
TU491146 True 4225 lncRNA 0.40 2 69699036 69703291
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110524447 LOC106613914 coding downstream 36934 69551803 ~ 69619075 (-)
LOC110524442 LOC106613910 coding downstream 305458 69239531 ~ 69350551 (-)
si:dkey-21p1.3 LOC106613908 coding downstream 427340 69198487 ~ 69228669 (-)
soat1 soat1 coding downstream 457750 69187862 ~ 69198259 (-)
LOC110524437 abl2 coding downstream 468748 69143474 ~ 69187261 (-)
LOC110524449 LOC106613916 coding upstream 1580 69704871 ~ 69714330 (-)
LOC110524450 k0841 coding upstream 11991 69715282 ~ 69728426 (-)
LOC110524451 LOC106613917 coding upstream 35072 69738363 ~ 69743354 (-)
LOC110524454 rfc4 coding upstream 41295 69744586 ~ 69751448 (-)
LOC110524457 LOC106584309 coding upstream 122019 69825310 ~ 69834151 (-)
G433725 NA non-coding downstream 99518 69555019 ~ 69556491 (-)
G433683 LOC106613912 non-coding downstream 131219 69486406 ~ 69524790 (-)
G433697 NA non-coding downstream 151083 69502514 ~ 69504926 (-)
G433688 NA non-coding downstream 166251 69489450 ~ 69489758 (-)
G433682 NA non-coding downstream 169605 69486194 ~ 69486404 (-)
G433814 NA non-coding upstream 26264 69729555 ~ 69729792 (-)
G433818 NA non-coding upstream 29664 69732955 ~ 69733165 (-)
G433820 NA non-coding upstream 33653 69736944 ~ 69737409 (-)
G433889 NA non-coding upstream 164042 69867333 ~ 69886159 (-)
G433918 ect2 non-coding upstream 194638 69897929 ~ 69899326 (-)
G432513 NA other downstream 649903 69004619 ~ 69006106 (-)
G432338 NA other downstream 900952 68748558 ~ 68755057 (-)
G432310 LOC106613894 other downstream 948561 68699821 ~ 68707448 (-)
bend5 LOC106584333 other downstream 1303264 68331871 ~ 68352828 (-)
G435234 NA other upstream 1287601 70990892 ~ 70991798 (-)
G435176 NA other upstream 1364734 71068025 ~ 71068887 (-)
LOC110524478 LOC106613944 other upstream 1525891 71226012 ~ 71242283 (-)
il23r LOC106613945 other upstream 1583099 71285725 ~ 71308015 (-)
G436172 LOC100136696 other upstream 2337671 72040962 ~ 72121697 (-)

Expression

G433735 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G433735 Expression in each Bioproject

Bar chart with 17 bars.
G433735 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035509 NA non-coding NC_007119.7 CM002892.2 14241585 ~ 14246353 (+)
eurasian perch (Perca fluviatilis) G97296 NA non-coding NC_053120.1 CM020917.1 22156115 ~ 22157649 (-)