Gene
RNA
| Item | Value |
|---|---|
| gene id | G432892 |
| gene name | LOC106613916 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 69706115 ~ 69706745 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| paired amphipathic helix protein Sin3b-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU490255 | True | 303 | lncRNA | 0.55 | 2 | 69706115 | 69706745 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524448 | LOC106613915 | coding | upstream | 2843 | 69614131 ~ 69703302 (+) |
| LOC110524446 | LOC106613913 | coding | upstream | 162066 | 69529529 ~ 69544049 (+) |
| LOC110524444 | LOC106613912 | coding | upstream | 165952 | 69505495 ~ 69540163 (+) |
| LOC110524443 | cep350 | coding | upstream | 201107 | 69466271 ~ 69505008 (+) |
| LOC118964640 | NA | coding | upstream | 483805 | 69196382 ~ 69222310 (+) |
| LOC110524452 | LOC106613919 | coding | downstream | 35671 | 69742416 ~ 69745116 (+) |
| mcf2l2 | LOC106613920 | coding | downstream | 51481 | 69758226 ~ 69869326 (+) |
| ect2 | ect2 | coding | downstream | 164972 | 69871717 ~ 69907563 (+) |
| nlgn1 | nlgn1 | coding | downstream | 359110 | 70065855 ~ 70348330 (+) |
| LOC110524461 | naaladl2 | coding | downstream | 748720 | 70455465 ~ 70738345 (+) |
| G432803 | NA | non-coding | upstream | 119719 | 69568625 ~ 69586396 (+) |
| G432783 | NA | non-coding | upstream | 222528 | 69483267 ~ 69483587 (+) |
| G432730 | NA | non-coding | upstream | 294383 | 69411520 ~ 69411732 (+) |
| G432914 | NA | non-coding | downstream | 27141 | 69733886 ~ 69734171 (+) |
| G432916 | NA | non-coding | downstream | 30309 | 69737054 ~ 69737303 (+) |
| G432931 | NA | non-coding | downstream | 47579 | 69754324 ~ 69754528 (+) |
| G432959 | NA | non-coding | downstream | 93206 | 69799951 ~ 69800841 (+) |
| G433018 | NA | non-coding | downstream | 210405 | 69917150 ~ 69917431 (+) |
| LOC110524423 | LOC106613476 | other | upstream | 1492011 | 68212224 ~ 68214236 (+) |
| G430796 | LOC106613888 | other | upstream | 1602581 | 68103179 ~ 68103534 (+) |
| LOC110524407 | LOC106613876 | other | upstream | 2241792 | 67458540 ~ 67464323 (+) |
| G429156 | NA | other | upstream | 2657951 | 66981949 ~ 67048164 (+) |
| G428696 | NA | other | upstream | 3563510 | 66142079 ~ 66142605 (+) |
| G434653 | NA | other | downstream | 1252865 | 70959610 ~ 70959932 (+) |
| G434792 | LOC106613943 | other | downstream | 1512044 | 71218789 ~ 71223578 (+) |
| G434829 | NA | other | downstream | 1591870 | 71298615 ~ 71298900 (+) |
| ralgps2 | LOC106613957 | other | downstream | 1969126 | 71552653 ~ 71687963 (+) |
| G436403 | NA | other | downstream | 2796715 | 72503460 ~ 72504435 (+) |
