Gene
RNA
| Item | Value |
|---|---|
| gene id | G433918 |
| gene name | ect2 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 69897929 ~ 69899326 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ect2 | Predicted to enable guanyl-nucleotide exchange factor activity. Acts upstream of or within cytokinetic process. Predicted to be located in cytoplasm. Predicted to be active in cell cortex and nucleus. Is expressed in midbrain. Orthologous to human ECT2 (epithelial cell transforming 2). |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU491353 | True | 509 | lncRNA | 0.52 | 3 | 69897929 | 69899326 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524457 | LOC106584309 | coding | downstream | 63778 | 69825310 ~ 69834151 (-) |
| LOC110524454 | rfc4 | coding | downstream | 146481 | 69744586 ~ 69751448 (-) |
| LOC110524451 | LOC106613917 | coding | downstream | 154575 | 69738363 ~ 69743354 (-) |
| LOC110524450 | k0841 | coding | downstream | 169503 | 69715282 ~ 69728426 (-) |
| LOC110524449 | LOC106613916 | coding | downstream | 183599 | 69704871 ~ 69714330 (-) |
| LOC110522884 | LOC106604339 | coding | upstream | 20831 | 69920157 ~ 69921094 (-) |
| LOC110524459 | spata16 | coding | upstream | 50878 | 69950204 ~ 70004717 (-) |
| LOC110524463 | tbl1xr1 | coding | upstream | 937489 | 70836815 ~ 70870397 (-) |
| LOC110524467 | zmat3 | coding | upstream | 1122346 | 71021672 ~ 71033577 (-) |
| LOC110524468 | LOC106613935 | coding | upstream | 1146716 | 71046042 ~ 71057781 (-) |
| G433889 | NA | non-coding | downstream | 11770 | 69867333 ~ 69886159 (-) |
| G433820 | NA | non-coding | downstream | 160520 | 69736944 ~ 69737409 (-) |
| G433818 | NA | non-coding | downstream | 164764 | 69732955 ~ 69733165 (-) |
| G433814 | NA | non-coding | downstream | 168137 | 69729555 ~ 69729792 (-) |
| G433735 | NA | non-coding | downstream | 194638 | 69656009 ~ 69703291 (-) |
| G433938 | NA | non-coding | upstream | 25335 | 69924661 ~ 69924861 (-) |
| G433940 | NA | non-coding | upstream | 27818 | 69927144 ~ 69991777 (-) |
| G433950 | NA | non-coding | upstream | 40268 | 69939594 ~ 69965405 (-) |
| G434011 | NA | non-coding | upstream | 135605 | 70034931 ~ 70035234 (-) |
| G433683 | LOC106613912 | other | downstream | 373139 | 69486406 ~ 69524790 (-) |
| G432513 | NA | other | downstream | 891823 | 69004619 ~ 69006106 (-) |
| G432338 | NA | other | downstream | 1142872 | 68748558 ~ 68755057 (-) |
| G432310 | LOC106613894 | other | downstream | 1190481 | 68699821 ~ 68707448 (-) |
| bend5 | LOC106584333 | other | downstream | 1545184 | 68331871 ~ 68352828 (-) |
| G435234 | NA | other | upstream | 1091566 | 70990892 ~ 70991798 (-) |
| G435176 | NA | other | upstream | 1168699 | 71068025 ~ 71068887 (-) |
| LOC110524478 | LOC106613944 | other | upstream | 1329856 | 71226012 ~ 71242283 (-) |
| il23r | LOC106613945 | other | upstream | 1387064 | 71285725 ~ 71308015 (-) |
| G436172 | LOC100136696 | other | upstream | 2141636 | 72040962 ~ 72121697 (-) |
