XLOC_023510 (ccl34b.3)



Basic Information


Item Value
gene id XLOC_023510
gene name ccl34b.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 27407955 ~ 27409599 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00046514
ttattgaatatattcGCCAAGCAAAAGTCTTGAATAGATCCTTTCAGAGCAGAGCAAGAGTGAGAGTTGAAAATCTGTGAGAATGGAGACACAAAAGATCCTTGTCTTAAATTGGGCTGTTGTGCTTATTGCATCTGTTATCTGGTGTATAACAACAGATGCTAAAGACATGATGCTATGCTGTACTTCAGTCTCCAGATTAGAGGTGACTGATCCTATCATCGGTTTCAGGATCCAGCGTGAAAGTCGTCCTTGTGTGAATGCCATCCTATTTGAGACTGAAAGAGGTGCCTTCTGCTCTAGTCCGAGACAACCATGGGTGCGAAGCAAAGTTATGCAGTTTTTAGCTCAAAGAAATAGTCCAACCTCCCCGCTGCCACCATTATCATCCGCCACCAGTAACGAAAAACCTACAATAACTAAACCAGATGAAAGCAAAGGGGTCCAGTTCCCGGGTTCCTCATTTCCAGCAGCATCACCCAAGTCAACCGTGTCTTCCATGACCGCCTCCTCTCTAAGtaactactgtatatataaagagTAACAGTTGGCATGAAGGCTGATGCAGCACTGACTTGTTTGAATGATgatgtaaaaatacaattaaatgaatgccCAGCTATTGCA

Function


symbol description
ccl34b.3 Predicted to enable CCR chemokine receptor binding activity and chemokine activity. Predicted to be involved in several processes, including cellular response to cytokine stimulus; leukocyte chemotaxis; and positive regulation of ERK1 and ERK2 cascade. Predicted to act upstream of or within immune response. Predicted to be located in extracellular region. Predicted to be active in extracellular space.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000032993

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00046514 True 627 mRNA 0.43 5 27407955 27409599

Neighbor


gene id symbol gene type direction distance location
XLOC_023509 ccl34b.1 coding downstream 7325 27396989 ~ 27400630 (-)
XLOC_023508 zmynd11 coding downstream 151282 27223952 ~ 27256673 (-)
XLOC_023507 NA coding downstream 412791 26948712 ~ 26995164 (-)
XLOC_023506 msl2b coding downstream 462565 26941197 ~ 26945390 (-)
XLOC_023505 fndc3bb coding downstream 522058 26753956 ~ 26885897 (-)
XLOC_023511 ccl34b.4 coding upstream 6993 27416592 ~ 27419198 (-)
XLOC_023512 si:dkey-25o1.7 coding upstream 11477 27421076 ~ 27423697 (-)
XLOC_023513 CR383669.2 coding upstream 18542 27428141 ~ 27430612 (-)
XLOC_023514 si:dkey-25o1.7 coding upstream 25277 27434876 ~ 27436319 (-)
XLOC_023515 ccl34b.8 coding upstream 40486 27450085 ~ 27452488 (-)
XLOC_023665 dre-mir-735 misc upstream 10768362 38177961 ~ 38178027 (-)
XLOC_023503 NA non-coding downstream 759932 26641899 ~ 26648023 (-)
XLOC_023496 NA non-coding downstream 1038770 26354696 ~ 26369185 (-)
XLOC_023491 NA non-coding downstream 1171377 26232700 ~ 26236578 (-)
XLOC_023490 NA non-coding downstream 1375684 26031248 ~ 26032271 (-)
XLOC_023517 NA non-coding upstream 53337 27462936 ~ 27463524 (-)
XLOC_023518 NA non-coding upstream 53962 27463561 ~ 27464451 (-)
XLOC_023520 NA non-coding upstream 80216 27489815 ~ 27491197 (-)
XLOC_023521 NA non-coding upstream 347277 27756876 ~ 27776814 (-)
XLOC_023523 NA non-coding upstream 499356 27908955 ~ 27951204 (-)

Expression



Co-expression Network