G433093


Basic Information

Item Value
gene id G433093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 70264126 ~ 70281207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU490468
AGATTTTGTATTTGTCTTTTGTTTATGCTTTTATTAATTGTGTTTAGGAAGTGATAGAGCCATAAACAACTTCCCCATACAACCATCAGTTAGTGCAGCAACGCCGCTCATTTGGGAGGAAATGTAATTATATATTtcttgagtgtgtgtgcgtggttaACATCTGCCTAAGTTACTGCCCAGATCTTCCAGTCTAGATGACCAGACGACAGGTCCGGAACGGAGATCCCCAAACCAGACATCCCCTGGCAATTCCTGTGATGCTTGGCAGCTTCCAGAAAACCTACCAAGGTAGACCATCAGAAGGGGGACCgcaacagtggtcaccaactggACAGCTGCTGCCCAGCCTTCGAGCTGCCTGCTTCATTCGCATAAACCTTACCCAGGTCAACCACCAGAGGGGGACCACAACGATGGTCCACAACCAGGACAACCCACAGTCATTTTTATGTTGGTTTGCAATTTGCAGGTTAATCGCAAGATTGAACCCAACAAGGTGagactgtcatgacgttgccctgttgTATGAGGTTcatgacccccataaatacctttccccctttTCTTTCCACCCTACAGAATGGACACTTGTAGTAAAGCCCTTCTTTTACATAGAGtatggtaacatcaaaaggttggggaaaggtacaatatttctgtaatccaaccagttgaaagtgtTGGTACTTAAAGAATTGGTACattggtacttaaagaatatgatgttAGATCAGTTGGTGTCTGGGACATTATATCAGATTATAAGATTACATAaattgtatcttggaaagtccacacattctagttatcagattcacatggaattgttgtacAATTTAagtgtttaaatatgaaactatttgtgaaaagactAAATGTAATTTTAGATTCTAAATGAGAAAATTGTAAACTATGCTCACTCAGTGACCAGGCCCAATTGGACAGACATTGGTTgagaactatgaaacacaccTTTCTCTCCCCCAATACAAAATCCCGTTGACGGAAGTCAACCTCAGTTCCCGACGACGTGAGGGCTGGTATCCATACGTTAATTTCAACATGGAGGTGATGATCACCATGCTGGAAGGATGAATTTCTACTAGACCAGCCAGAACTCAGTGCTGGCTGATTCTGGCAAAATGTTATGAAccttgaactcttattcactaaagaagaagtgatacatcctagaAGACGAGTTATCAGCTGCAGCTGTAAATGTACGTGGCCTAGGAAAGGACAGACAATCTCCTAATAAGAATGACAGGGTACAACATATCTGCACTACGACCAGAAATATTATTCGAAGGACAAGGGCGATCTCTGCTGAGCAACCCAGTCTTCCATCTTCGACCCATctatcgaagcgcagctcagtgTAAATATATAGATTGCATTTTCCCTTTCCCAAATGTGCTGTTATTGGAATGCATACATTTCTGTATTTATGGTAGCATAGCTTCTCAAGGTCCGATAGAGACCCAATTGCCTTTGGCCTTCagtcttcccgctctttcattcaaacccaacctttgtgtaaccagccgtcctATCGGGTTAGCCCACTATGGGCTTTTCATGACATGattagtaatcaatgtatgatctatcctgtgtatatacagttgaagtcggaagtttacatacacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490468 True 1656 lncRNA 0.42 2 70264126 70281207

Neighbor

gene id symbol gene type direction distance location
ect2 ect2 coding upstream 356563 69871717 ~ 69907563 (+)
mcf2l2 LOC106613920 coding upstream 394800 69758226 ~ 69869326 (+)
LOC110524452 LOC106613919 coding upstream 519010 69742416 ~ 69745116 (+)
LOC110524448 LOC106613915 coding upstream 560854 69614131 ~ 69703302 (+)
LOC110524446 LOC106613913 coding upstream 720077 69529529 ~ 69544049 (+)
LOC110524461 naaladl2 coding downstream 174258 70455465 ~ 70738345 (+)
si:ch211-51h4.2 LOC106613927 coding downstream 458001 70739208 ~ 70836826 (+)
si:ch211-247n2.1 LOC106613930 coding downstream 700850 70982057 ~ 71012481 (+)
pik3ca pik3ca coding downstream 752813 71034020 ~ 71045983 (+)
lamp3 lamp3 coding downstream 768849 71050056 ~ 71053212 (+)
G433300 NA non-coding upstream 12372 70251510 ~ 70251754 (+)
G433298 NA non-coding upstream 13865 70250008 ~ 70250261 (+)
G433297 NA non-coding upstream 14755 70249127 ~ 70249371 (+)
G433293 NA non-coding upstream 17062 70246821 ~ 70247064 (+)
G433285 NA non-coding upstream 25782 70238095 ~ 70238344 (+)
G433355 NA non-coding downstream 51157 70332364 ~ 70338129 (+)
G434565 NA non-coding downstream 518450 70799657 ~ 70800461 (+)
G434512 NA non-coding downstream 562578 70843785 ~ 70846161 (+)
G434600 NA non-coding downstream 590017 70871224 ~ 70871447 (+)
LOC110524423 LOC106613476 other upstream 2050022 68212224 ~ 68214236 (+)
G430796 LOC106613888 other upstream 2160592 68103179 ~ 68103534 (+)
LOC110524407 LOC106613876 other upstream 2799803 67458540 ~ 67464323 (+)
G429156 NA other upstream 3215962 66981949 ~ 67048164 (+)
G428696 NA other upstream 4121521 66142079 ~ 66142605 (+)
G434653 NA other downstream 678403 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 937582 71218789 ~ 71223578 (+)
G434829 NA other downstream 1017408 71298615 ~ 71298900 (+)
ralgps2 LOC106613957 other downstream 1394664 71552653 ~ 71687963 (+)
G436403 NA other downstream 2222253 72503460 ~ 72504435 (+)

Expression


Co-expression Network