G434475



Basic Information


Item Value
gene id G434475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 70688943 ~ 70692179 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU491922
ggccagggtgtggcatgggtttttgtatgtggtgtgtatgtgtggggattgtagctagtggggtgttctagctaagtctatggctgtctgaagtggttctcaatcagaggcaggtgtttatcgttgtctctgattgggaaccatatttaggcagccatattctttgagtttgtcgtgggtgattgtccttagtgtcctgatgtcattgttctgtgttaggatgcacaagtataggctgtttcgggttttgttaagtttattgttttggtagtgtttgtgtttagtgtgttaattcattaaacatggattgcaatagacacgccgcattttggtccgactctccttc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU491922 True 346 lncRNA 0.43 2 70688943 70692179

Neighbor


gene id symbol gene type direction distance location
LOC110524459 spata16 coding downstream 684226 69950204 ~ 70004717 (-)
LOC110522884 LOC106604339 coding downstream 767849 69920157 ~ 69921094 (-)
LOC110524457 LOC106584309 coding downstream 854792 69825310 ~ 69834151 (-)
LOC110524454 rfc4 coding downstream 937495 69744586 ~ 69751448 (-)
LOC110524451 LOC106613917 coding downstream 945589 69738363 ~ 69743354 (-)
LOC110524463 tbl1xr1 coding upstream 144636 70836815 ~ 70870397 (-)
LOC110524467 zmat3 coding upstream 329493 71021672 ~ 71033577 (-)
LOC110524468 LOC106613935 coding upstream 353863 71046042 ~ 71057781 (-)
LOC110524470 LOC106613933 coding upstream 377186 71069365 ~ 71106201 (-)
LOC110524473 LOC106613938 coding upstream 471140 71163319 ~ 71177625 (-)
G434260 NA non-coding downstream 275653 70381955 ~ 70413290 (-)
G434175 NA non-coding downstream 427274 70261434 ~ 70261669 (-)
G434173 NA non-coding downstream 430938 70257609 ~ 70258005 (-)
G434172 NA non-coding downstream 431509 70257233 ~ 70257434 (-)
G434169 NA non-coding downstream 435195 70253547 ~ 70253748 (-)
G434488 NA non-coding upstream 18254 70710433 ~ 70710831 (-)
G434493 NA non-coding upstream 22984 70715163 ~ 70715385 (-)
G434504 NA non-coding upstream 37938 70730117 ~ 70730349 (-)
G434508 NA non-coding upstream 45633 70737812 ~ 70738224 (-)
G435083 NA non-coding upstream 191324 70883503 ~ 70885481 (-)
G433683 LOC106613912 other downstream 1164153 69486406 ~ 69524790 (-)
G432513 NA other downstream 1682837 69004619 ~ 69006106 (-)
G432338 NA other downstream 1933886 68748558 ~ 68755057 (-)
G432310 LOC106613894 other downstream 1981495 68699821 ~ 68707448 (-)
bend5 LOC106584333 other downstream 2336198 68331871 ~ 68352828 (-)
G435234 NA other upstream 298713 70990892 ~ 70991798 (-)
G435176 NA other upstream 375846 71068025 ~ 71068887 (-)
LOC110524478 LOC106613944 other upstream 537003 71226012 ~ 71242283 (-)
il23r LOC106613945 other upstream 594211 71285725 ~ 71308015 (-)
G436172 LOC100136696 other upstream 1348783 72040962 ~ 72121697 (-)

Expression



Co-expression Network