G434508



Basic Information


Item Value
gene id G434508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 70737812 ~ 70738224 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU491955
AAGTGGCCAAAACCCTGATACCTATTACTTAAGAGACTAAAGACATGATCACAATTTACAACAATATAAGACTGGGTAAACTCACAATCAAGATGCTTAGTGCAAATACATGCAATATTCATGCAAGTCAATGCAGTATTTCATGTAACACATCATGCAACACATCTAGCTTGTGTAATATTATATGATTGTACAAAGCATCACATAAATAACTGTACAATTGAAGACATTTGATATAGCCTATTTGAAGCTCATGGTCCAACTAAAAGCTACTATATTCGGAGGTACAGTAAGAGCATAACAATCTGCCAtttcatactacatactacagtGAATGATGGAACTACTTCCTTACTTACCATGCTTCCAGATAACTCATACCAAAGGCTTGTTGCTGTTGCCTTATAAAACCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU491955 True 413 lncRNA 0.35 1 70737812 70738224

Neighbor


gene id symbol gene type direction distance location
LOC110524459 spata16 coding downstream 733095 69950204 ~ 70004717 (-)
LOC110522884 LOC106604339 coding downstream 816718 69920157 ~ 69921094 (-)
LOC110524457 LOC106584309 coding downstream 903661 69825310 ~ 69834151 (-)
LOC110524454 rfc4 coding downstream 986364 69744586 ~ 69751448 (-)
LOC110524451 LOC106613917 coding downstream 994458 69738363 ~ 69743354 (-)
LOC110524463 tbl1xr1 coding upstream 98591 70836815 ~ 70870397 (-)
LOC110524467 zmat3 coding upstream 283448 71021672 ~ 71033577 (-)
LOC110524468 LOC106613935 coding upstream 307818 71046042 ~ 71057781 (-)
LOC110524470 LOC106613933 coding upstream 331141 71069365 ~ 71106201 (-)
LOC110524473 LOC106613938 coding upstream 425095 71163319 ~ 71177625 (-)
G434504 NA non-coding downstream 7463 70730117 ~ 70730349 (-)
G434493 NA non-coding downstream 22427 70715163 ~ 70715385 (-)
G434488 NA non-coding downstream 26981 70710433 ~ 70710831 (-)
G434475 NA non-coding downstream 45633 70688943 ~ 70692179 (-)
G434260 NA non-coding downstream 324522 70381955 ~ 70413290 (-)
G435083 NA non-coding upstream 145279 70883503 ~ 70885481 (-)
G435199 NA non-coding upstream 200131 70938355 ~ 70938772 (-)
G435209 NA non-coding upstream 215493 70953717 ~ 70953979 (-)
G435213 NA non-coding upstream 221180 70959404 ~ 70960042 (-)
G435214 NA non-coding upstream 222076 70960300 ~ 70960576 (-)
G433683 LOC106613912 other downstream 1213022 69486406 ~ 69524790 (-)
G432513 NA other downstream 1731706 69004619 ~ 69006106 (-)
G432338 NA other downstream 1982755 68748558 ~ 68755057 (-)
G432310 LOC106613894 other downstream 2030364 68699821 ~ 68707448 (-)
bend5 LOC106584333 other downstream 2385067 68331871 ~ 68352828 (-)
G435234 NA other upstream 252668 70990892 ~ 70991798 (-)
G435176 NA other upstream 329801 71068025 ~ 71068887 (-)
LOC110524478 LOC106613944 other upstream 490958 71226012 ~ 71242283 (-)
il23r LOC106613945 other upstream 548166 71285725 ~ 71308015 (-)
G436172 LOC100136696 other upstream 1302738 72040962 ~ 72121697 (-)

Expression



Co-expression Network