G435213



Basic Information


Item Value
gene id G435213
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 70959404 ~ 70960042 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU492738
ggctgagaacgcaccatTTTGGGGCCCCAATGTTGACACGTTGACACAGTGTTGACGcgtttaaaggttttactcacgtcggctgcagtgaaggagagcctgcaggttttggtagcgggccgtgtcagtggcactgtattgtcctcaaagcgagcaaagaggttgtttagtctgtctgggagcaagacatcctggtccacgacggggctggttttccttttgtagtccgtgattgactgtagaccctgccacatacctctcgtgtctgagccgttgaattgcgactctactttgtctctatactgacgcttagcttgtttgattgccttgcggagggaatagctacactgtttgtattcggtcatgtttccggtcaccttgccctgattaaaagcagtggttcgctctttcagcaaatgctgccatcaatccacggtttctggtttgggaatgttttaatagacgctgtgggtacgacatcgccgatgcacttgctaataaacccgctcaccgaatcagcgtattcatcaatgttgactccaacctaagtgtatgtaaacttccactGTTGTTAGGTCAGACAACCAAATGTCAGTCAAAtacaaacattccattccagctaaacaatggatatatagc

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU492738 True 639 lncRNA 0.48 1 70959404 70960042

Neighbor


gene id symbol gene type direction distance location
LOC110524463 tbl1xr1 coding downstream 89007 70836815 ~ 70870397 (-)
LOC110524459 spata16 coding downstream 954687 69950204 ~ 70004717 (-)
LOC110522884 LOC106604339 coding downstream 1038310 69920157 ~ 69921094 (-)
LOC110524457 LOC106584309 coding downstream 1125253 69825310 ~ 69834151 (-)
LOC110524454 rfc4 coding downstream 1207956 69744586 ~ 69751448 (-)
LOC110524467 zmat3 coding upstream 61630 71021672 ~ 71033577 (-)
LOC110524468 LOC106613935 coding upstream 86000 71046042 ~ 71057781 (-)
LOC110524470 LOC106613933 coding upstream 109323 71069365 ~ 71106201 (-)
LOC110524473 LOC106613938 coding upstream 203277 71163319 ~ 71177625 (-)
LOC110524474 LOC106613939 coding upstream 234732 71194774 ~ 71199198 (-)
G435209 NA non-coding downstream 5425 70953717 ~ 70953979 (-)
G435199 NA non-coding downstream 20632 70938355 ~ 70938772 (-)
G435083 NA non-coding downstream 73923 70883503 ~ 70885481 (-)
G434508 NA non-coding downstream 221180 70737812 ~ 70738224 (-)
G434504 NA non-coding downstream 229055 70730117 ~ 70730349 (-)
G435214 NA non-coding upstream 258 70960300 ~ 70960576 (-)
G435228 NA non-coding upstream 22486 70982528 ~ 70982735 (-)
G435232 NA non-coding upstream 24866 70984908 ~ 70985350 (-)
G435233 NA non-coding upstream 29032 70989074 ~ 70989966 (-)
G435236 NA non-coding upstream 34180 70994222 ~ 70994453 (-)
G433683 LOC106613912 other downstream 1434614 69486406 ~ 69524790 (-)
G432513 NA other downstream 1953298 69004619 ~ 69006106 (-)
G432338 NA other downstream 2204347 68748558 ~ 68755057 (-)
G432310 LOC106613894 other downstream 2251956 68699821 ~ 68707448 (-)
bend5 LOC106584333 other downstream 2606659 68331871 ~ 68352828 (-)
G435234 NA other upstream 30850 70990892 ~ 70991798 (-)
G435176 NA other upstream 107983 71068025 ~ 71068887 (-)
LOC110524478 LOC106613944 other upstream 269140 71226012 ~ 71242283 (-)
il23r LOC106613945 other upstream 326348 71285725 ~ 71308015 (-)
G436172 LOC100136696 other upstream 1080920 72040962 ~ 72121697 (-)

Expression



Co-expression Network