Gene
RNA
| Item | Value |
|---|---|
| gene id | G435243 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 71003677 ~ 71003948 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: calcium-activated potassium channel subunit beta-2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU492782 | True | 272 | lncRNA | 0.40 | 1 | 71003677 | 71003948 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524463 | tbl1xr1 | coding | downstream | 133280 | 70836815 ~ 70870397 (-) |
| LOC110524459 | spata16 | coding | downstream | 998960 | 69950204 ~ 70004717 (-) |
| LOC110522884 | LOC106604339 | coding | downstream | 1082583 | 69920157 ~ 69921094 (-) |
| LOC110524457 | LOC106584309 | coding | downstream | 1169526 | 69825310 ~ 69834151 (-) |
| LOC110524454 | rfc4 | coding | downstream | 1252229 | 69744586 ~ 69751448 (-) |
| LOC110524467 | zmat3 | coding | upstream | 17724 | 71021672 ~ 71033577 (-) |
| LOC110524468 | LOC106613935 | coding | upstream | 42094 | 71046042 ~ 71057781 (-) |
| LOC110524470 | LOC106613933 | coding | upstream | 65417 | 71069365 ~ 71106201 (-) |
| LOC110524473 | LOC106613938 | coding | upstream | 159371 | 71163319 ~ 71177625 (-) |
| LOC110524474 | LOC106613939 | coding | upstream | 190826 | 71194774 ~ 71199198 (-) |
| G435240 | NA | non-coding | downstream | 4585 | 70998782 ~ 70999092 (-) |
| G435237 | NA | non-coding | downstream | 8829 | 70994594 ~ 70994848 (-) |
| G435236 | NA | non-coding | downstream | 9224 | 70994222 ~ 70994453 (-) |
| G435233 | NA | non-coding | downstream | 13711 | 70989074 ~ 70989966 (-) |
| G435232 | NA | non-coding | downstream | 18327 | 70984908 ~ 70985350 (-) |
| G435244 | NA | non-coding | upstream | 301 | 71004249 ~ 71004469 (-) |
| G435246 | LOC106613930 | non-coding | upstream | 2286 | 71006234 ~ 71010603 (-) |
| G435182 | NA | non-coding | upstream | 13456 | 71017404 ~ 71019623 (-) |
| G435177 | NA | non-coding | upstream | 62592 | 71066540 ~ 71067820 (-) |
| G435282 | ycu9 | non-coding | upstream | 108851 | 71112799 ~ 71114579 (-) |
| G435234 | NA | other | downstream | 11879 | 70990892 ~ 70991798 (-) |
| G433683 | LOC106613912 | other | downstream | 1478887 | 69486406 ~ 69524790 (-) |
| G432513 | NA | other | downstream | 1997571 | 69004619 ~ 69006106 (-) |
| G432338 | NA | other | downstream | 2248620 | 68748558 ~ 68755057 (-) |
| G432310 | LOC106613894 | other | downstream | 2296229 | 68699821 ~ 68707448 (-) |
| G435176 | NA | other | upstream | 64077 | 71068025 ~ 71068887 (-) |
| LOC110524478 | LOC106613944 | other | upstream | 225234 | 71226012 ~ 71242283 (-) |
| il23r | LOC106613945 | other | upstream | 282442 | 71285725 ~ 71308015 (-) |
| G436172 | LOC100136696 | other | upstream | 1037014 | 72040962 ~ 72121697 (-) |
| G436830 | LOC106605384 | other | upstream | 1584336 | 72588284 ~ 72588576 (-) |
